RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
ITGB1-212ENST00000480226 SMPD4Q9NXE4 827 aa6.64□□□□□ -1.35
ITGB1-212ENST00000480226 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
ITGB1-212ENST00000480226 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
ITGB1-212ENST00000480226 ZNF536O15090 1300 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 PRODHO43272 600 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 MSCO60682 206 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
ITGB1-212ENST00000480226 ATP2B1P20020 1258 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 RBL2Q08999 1139 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 SURF1Q15526 300 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 NSMFQ6X4W1 530 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 PIP4K2CQ8TBX8 421 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 SAMD11Q96NU1 681 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 ZFYVE21Q9BQ24 234 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 TMEM168Q9H0V1 697 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
ITGB1-212ENST00000480226 PABPC1P11940 636 aaKnown RBP6.62□□□□□ -1.35
ITGB1-212ENST00000480226 GTF2F1P35269 517 aaKnown RBP eCLIP6.62□□□□□ -1.35
ITGB1-212ENST00000480226 SPIRE1Q08AE8 756 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 KIZQ2M2Z5 673 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 LBX2Q6XYB7 198 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 DPH6Q7L8W6 267 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 LRRC47Q8N1G4 583 aaKnown RBP6.62□□□□□ -1.35
ITGB1-212ENST00000480226 TTLL11Q8NHH1 800 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
ITGB1-212ENST00000480226 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 ARHGEF4Q9NR80 690 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 MYRFQ9Y2G1 1151 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 MSRB2Q9Y3D2 182 aa6.62□□□□□ -1.35
ITGB1-212ENST00000480226 TRAV20A0A0B4J274 112 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 SLC27A2O14975 620 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 INSRRP14616 1297 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-212ENST00000480226 ADAM17P78536 824 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 IFRD2Q12894 506 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-212ENST00000480226 TMC5Q6UXY8 1006 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 OTOP3Q7RTS5 596 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 IFNL3Q8IZI9 196 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 TTC9BQ8N6N2 239 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 ZNF669Q96BR6 464 aaPredicted RBP6.61□□□□□ -1.35
ITGB1-212ENST00000480226 LOXL4Q96JB6 756 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 PPARGC1AQ9UBK2 798 aaKnown RBP6.61□□□□□ -1.35
ITGB1-212ENST00000480226 FTSJ1Q9UET6 329 aa6.61□□□□□ -1.35
ITGB1-212ENST00000480226 GNAT1P11488 350 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 GRK2P25098 689 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 GRK3P35626 688 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-212ENST00000480226 GPR85P60893 370 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 SERINC3Q13530 473 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
ITGB1-212ENST00000480226 KCNT2Q6UVM3 1135 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 CLEC4DQ8WXI8 215 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 OSBP2Q969R2 916 aa6.6□□□□□ -1.35
ITGB1-212ENST00000480226 U2SURPO15042 1029 aaKnown RBP6.59□□□□□ -1.35
ITGB1-212ENST00000480226 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 B4GALT3O60512 393 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 GRIN1Q05586 938 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 TUSC3Q13454 348 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 NTRK3Q16288 839 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 STYK1Q6J9G0 422 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 CKAP2LQ8IYA6 745 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 KLHL36Q8N4N3 616 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 CHST13Q8NET6 341 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
ITGB1-212ENST00000480226 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
ITGB1-212ENST00000480226 ARMC5Q96C12 935 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 KCNJ15Q99712 375 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 WASF3Q9UPY6 502 aa6.59□□□□□ -1.35
ITGB1-212ENST00000480226 FAM47E-STBD1D6RA91 191 aa6.58□□□□□ -1.36
ITGB1-212ENST00000480226 COL6A2P12110 1019 aa6.58□□□□□ -1.36
ITGB1-212ENST00000480226 PUM1Q14671 1186 aaKnown RBP eCLIP6.58□□□□□ -1.363e-11■□□□□ 8.1
ITGB1-212ENST00000480226 PAN2Q504Q3 1202 aaKnown RBP6.58□□□□□ -1.36
ITGB1-212ENST00000480226 CPZQ66K79 652 aa6.58□□□□□ -1.36
ITGB1-212ENST00000480226 UHMK1Q8TAS1 419 aaKnown RBP6.58□□□□□ -1.36
ITGB1-212ENST00000480226 BARX1Q9HBU1 254 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-212ENST00000480226 DLL4Q9NR61 685 aa6.58□□□□□ -1.36
ITGB1-212ENST00000480226 SOD2P04179 222 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 FAHP16930 419 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 PKN3Q6P5Z2 889 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 PROSER1Q86XN7 944 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 RBM12BQ8IXT5 1001 aaKnown RBP6.57□□□□□ -1.36
ITGB1-212ENST00000480226 DTX3Q8N9I9 347 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 MBD6Q96DN6 1003 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 C8orf49Q96NF6 230 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-212ENST00000480226 PDGFDQ9GZP0 370 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-212ENST00000480226 RBPJLQ9UBG7 517 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 DSEQ9UL01 958 aa6.57□□□□□ -1.36
ITGB1-212ENST00000480226 BLACEA4D250 179 aa6.56□□□□□ -1.36
ITGB1-212ENST00000480226 NPEPPSL1A6NEC2 478 aa6.56□□□□□ -1.36
ITGB1-212ENST00000480226 FBXO21O94952 628 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms