RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 LRCH2Q5VUJ6 765 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 CYFIP1Q7L576 1253 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 SLC5A5Q92911 643 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 ARMC5Q96C12 935 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 ZNF333Q96JL9 665 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 MTMR9Q96QG7 549 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 RIT2Q99578 217 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 UNC93B1Q9H1C4 597 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 TMEM60Q9H2L4 133 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 DDX20Q9UHI6 824 aaKnown RBP12.65□□□□□ -0.38
CLDN11-205ENST00000480067 TCEAL9Q9UHQ7 104 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
CLDN11-205ENST00000480067 SORBS3O60504 671 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 GH1P01241 217 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 KRT85P78386 507 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 ITGB3BPQ13352 177 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 MTFR1Q15390 333 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 HAS1Q92839 578 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 COPS5Q92905 334 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 GJA10Q969M2 543 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 SPC25Q9HBM1 224 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 POLR3EQ9NVU0 708 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 GNEQ9Y223 722 aaKnown RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 Q9Y3F1 56 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 NFASCO94856 1347 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 MYH7BA7E2Y1 1941 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 DDX39AO00148 427 aaKnown RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 NOP56O00567 594 aaKnown RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 DHX15O43143 795 aaKnown RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 ADCY6O43306 1168 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 SP4Q02446 784 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 SLC39A14Q15043 492 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 STK38Q15208 465 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 OR6J1Q8NGC5 347 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 SPATA33Q96N06 139 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 TEKT3Q9BXF9 490 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 BCAS3Q9H6U6 928 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 TTC12Q9H892 705 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-205ENST00000480067 XPNPEP3Q9NQH7 507 aa12.64□□□□□ -0.39
CLDN11-205ENST00000480067 MCM3APO60318 1980 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 PSMD10O75832 226 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 FARP2O94887 1054 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 PTGS1P23219 599 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 PRPHP41219 470 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 TECP42680 631 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 NASPP49321 788 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 KRT76Q01546 638 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 TMEM266Q2M3C6 531 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 ARL6IP4Q66PJ3 421 aaKnown RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 DEFB118Q96PH6 123 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
CLDN11-205ENST00000480067 SLC9A2Q9UBY0 812 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 SAMM50Q9Y512 469 aa12.63□□□□□ -0.39
CLDN11-205ENST00000480067 CHMP2AO43633 222 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 YEATS4O95619 227 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 PGK1P00558 417 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 C6orf222P0C671 652 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-205ENST00000480067 MARCKSP29966 332 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-205ENST00000480067 CPT1AP50416 773 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 PTPAQ15257 358 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 HSDL1Q3SXM5 330 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 GNASQ5JWF2 1037 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 LHX8Q68G74 356 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-205ENST00000480067 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 AFG1LQ8WV93 481 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 TNPO1Q92973 898 aaKnown RBP12.62□□□□□ -0.39
CLDN11-205ENST00000480067 CHAMP1Q96JM3 812 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 TMEM106CQ9BVX2 250 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 RAB34Q9BZG1 259 aa12.62□□□□□ -0.39
CLDN11-205ENST00000480067 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
CLDN11-205ENST00000480067 DNAH12Q6ZR08 3092 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 SPTLC2O15270 562 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 GJB1P08034 283 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 GJA9P57773 515 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 ACTR2P61160 394 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 FSCN1Q16658 493 aaKnown RBP12.61□□□□□ -0.39
CLDN11-205ENST00000480067 COL13A1Q5TAT6 717 aaPredicted RBP12.61□□□□□ -0.39
CLDN11-205ENST00000480067 RNF180Q86T96 592 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 SMAP1Q8IYB5 467 aaPredicted RBP12.61□□□□□ -0.39
CLDN11-205ENST00000480067 KCNG4Q8TDN1 519 aa12.61□□□□□ -0.39
CLDN11-205ENST00000480067 SEPT1Q8WYJ6 367 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms