RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 CCDC65Q8IXS2 484 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 NELFBQ8WX92 580 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 DDX12PQ92771 950 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 GPRASP2Q96D09 838 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 WNK4Q96J92 1243 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 RMDN3Q96TC7 470 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 HSD17B14Q9BPX1 270 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 EIF2AK1Q9BQI3 630 aaKnown RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 XPO4Q9C0E2 1151 aaKnown RBP12.3□□□□□ -0.44
VTI1A-204ENST00000480057 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 TBC1D22BQ9NU19 505 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 GDAQ9Y2T3 454 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 LOXHD1Q8IVV2 1947 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 PFASO15067 1338 aa12.3□□□□□ -0.44
VTI1A-204ENST00000480057 POTEB3A0JP26 581 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 IPO5O00410 1097 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 EYA4O95677 639 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 ARP10275 920 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 OSBPP22059 807 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CCNE1P24864 410 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CCND2P30279 289 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 SLC12A3P55017 1021 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 MRPS9P82933 396 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 BAATQ14032 418 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 KLHL10Q6JEL2 608 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 POTEBQ6S5H4 581 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 GADL1Q6ZQY3 521 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 NLRX1Q86UT6 975 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 VSIG10LQ86VR7 867 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 SMYD4Q8IYR2 804 aaPredicted RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 GUF1Q8N442 669 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 ANKRD20A12PQ8NF67 263 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 DNERQ8NFT8 737 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 GJA10Q969M2 543 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 OTUD5Q96G74 571 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CDHR1Q96JP9 859 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 IWS1Q96ST2 819 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
VTI1A-204ENST00000480057 KCNH7Q9NS40 1196 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
VTI1A-204ENST00000480057 FRMD3A2A2Y4 597 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 E9PMD0 336 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 KIF20AO95235 890 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 SLC25A27O95847 323 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 ATP1A3P13637 1013 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 CYP11B2P19099 503 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 UBXN2AP68543 259 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 IRX3P78415 501 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 MTMR1Q13613 665 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 IL31RAQ8NI17 732 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 P2RX5Q93086 422 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 OPTNQ96CV9 577 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 NACC1Q96RE7 527 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 SENP7Q9BQF6 1050 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 THAP9Q9H5L6 903 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 A1CFQ9NQ94 594 aaKnown RBP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 LIMA1Q9UHB6 759 aaKnown RBP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 SLC45A1Q9Y2W3 748 aa12.28□□□□□ -0.44
VTI1A-204ENST00000480057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
VTI1A-204ENST00000480057 A0A1B0GTH6 734 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 EML1O00423 815 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 SLITRK3O94933 977 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 LYPLA2O95372 231 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 NR3C2P08235 984 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 EIF2AK2P19525 551 aaKnown RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
VTI1A-204ENST00000480057 SFNP31947 248 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 JAK3P52333 1124 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 HERVK_113P62684 666 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 KRT76Q01546 638 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 STK4Q13043 487 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 SNAPC2Q13487 334 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 MOGSQ13724 837 aa12.27□□□□□ -0.45
VTI1A-204ENST00000480057 FILIP1LQ4L180 1135 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms