RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
PRKN-207ENST00000479615 EMSYQ7Z589 1322 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 C17orf102A2RUQ5 167 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 CKBP12277 381 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 METAP2P50579 478 aaKnown RBP eCLIP17.25■□□□□ 0.35
PRKN-207ENST00000479615 FUT2Q10981 343 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 SEMA3FQ13275 785 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 AP3B2Q13367 1082 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 MTMR1Q13613 665 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 MAFAQ8NHW3 353 aaPredicted RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 CCDC12Q8WUD4 166 aaPredicted RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
PRKN-207ENST00000479615 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 VWCEQ96DN2 955 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 JAKMIP1Q96N16 626 aaKnown RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 GAS2L1Q99501 681 aaPredicted RBP17.25■□□□□ 0.35
PRKN-207ENST00000479615 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
PRKN-207ENST00000479615 GRXCR1A8MXD5 290 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 CXCL10P02778 98 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 HOXC8P31273 242 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 PBX2P40425 430 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 ADCY7P51828 1080 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 WWC2Q6AWC2 1192 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 SERINC5Q86VE9 423 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 TCEANC2Q96MN5 208 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 JADE2Q9NQC1 790 aa17.24■□□□□ 0.35
PRKN-207ENST00000479615 LAMA2P24043 3122 aaKnown RBP17.23■□□□□ 0.35
PRKN-207ENST00000479615 ABHD14A-ACY1A0A1B0GW23 586 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 SMCO2A6NFE2 343 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 ITGB5P18084 799 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 KCNJ6P48051 423 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 CNKSR3Q6P9H4 555 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 Q6ZUG5 572 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 PPP1R13LQ8WUF5 828 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 DHX38Q92620 1227 aaKnown RBP17.23■□□□□ 0.35
PRKN-207ENST00000479615 ATP6V0A1Q93050 837 aa17.23■□□□□ 0.35
PRKN-207ENST00000479615 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
PRKN-207ENST00000479615 NRCAMQ92823 1304 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 SORBS3O60504 671 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
PRKN-207ENST00000479615 RPLP2P05387 115 aaKnown RBP17.22■□□□□ 0.35
PRKN-207ENST00000479615 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 KCNA2P16389 499 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 RPS6KB1P23443 525 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
PRKN-207ENST00000479615 UBE2SQ16763 222 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
PRKN-207ENST00000479615 BRF1Q92994 677 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 RNPEPQ9H4A4 650 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
PRKN-207ENST00000479615 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 NID2Q14112 1375 aa17.22■□□□□ 0.35
PRKN-207ENST00000479615 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 STXBP3O00186 592 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 SCG2P13521 617 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 GNA11P29992 359 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 CDC27P30260 824 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 ADD1P35611 737 aaKnown RBP17.21■□□□□ 0.35
PRKN-207ENST00000479615 EVCP57679 992 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 IKBKEQ14164 716 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 TRIM71Q2Q1W2 868 aaKnown RBP17.21■□□□□ 0.35
PRKN-207ENST00000479615 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.21■□□□□ 0.35
PRKN-207ENST00000479615 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 NKX2-4Q9H2Z4 354 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 SMARCAD1Q9H4L7 1026 aa17.21■□□□□ 0.35
PRKN-207ENST00000479615 RSPH10B2B2RC85 870 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
PRKN-207ENST00000479615 ATP9AO75110 1047 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 RSPH10BP0C881 870 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 TCF7P36402 384 aaPredicted RBP17.2■□□□□ 0.34
PRKN-207ENST00000479615 THPOP40225 353 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 ZNF618Q5T7W0 954 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 TAF2Q6P1X5 1199 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 NIPA1Q7RTP0 329 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 HERC6Q8IVU3 1022 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 BICD2Q8TD16 824 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 SDF4Q9BRK5 362 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 BCAS3Q9H6U6 928 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 JPH1Q9HDC5 661 aaPredicted RBP17.2■□□□□ 0.34
PRKN-207ENST00000479615 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 PPP4R2Q9NY27 417 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 YBX2Q9Y2T7 364 aaKnown RBP17.2■□□□□ 0.34
PRKN-207ENST00000479615 COL6A3P12111 3177 aa17.2■□□□□ 0.34
PRKN-207ENST00000479615 NFASCO94856 1347 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms