RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SCFD2Q8WU76 684 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 ATXN2LQ8WWM7 1075 aaKnown RBP10.2□□□□□ -0.78
DDX56-211ENST00000479602 SYMPKQ92797 1274 aaKnown RBP10.2□□□□□ -0.78
DDX56-211ENST00000479602 KAT2BQ92831 832 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 COPS5Q92905 334 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 CUL5Q93034 780 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 SCLYQ96I15 445 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 MTG1Q9BT17 334 aaPredicted RBP10.2□□□□□ -0.78
DDX56-211ENST00000479602 PHF20Q9BVI0 1012 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 PRDM12Q9H4Q4 367 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 PCDHA11Q9Y5I1 949 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 V9GY48 417 aaPredicted RBP10.2□□□□□ -0.78
DDX56-211ENST00000479602 B4DLN1 442 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 IQCF3P0C7M6 154 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 CCT2P78371 535 aaKnown RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 RBL2Q08999 1139 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 ORC2Q13416 577 aaPredicted RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 HSCBQ8IWL3 235 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 FBXO18Q8NFZ0 1043 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 PHOSPHO2Q8TCD6 241 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 TAAR1Q96RJ0 339 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 MPHOSPH6Q99547 160 aaKnown RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 CPVLQ9H3G5 476 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 C6orf50Q9HD87 102 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
DDX56-211ENST00000479602 MSRAQ9UJ68 235 aa10.19□□□□□ -0.78
DDX56-211ENST00000479602 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 GCOM1H8Y6P7 765 aaPredicted RBP10.18□□□□□ -0.78
DDX56-211ENST00000479602 RGS20O76081 388 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 POLR2MP0CAP2 368 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 TXNP10599 105 aaKnown RBP10.18□□□□□ -0.78
DDX56-211ENST00000479602 MYOGP15173 224 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 RFC2P35250 354 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 SREBF1P36956 1147 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 RABGGTBP53611 331 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 ARHGAP1Q07960 439 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 HOMER1Q86YM7 354 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 CCDC83Q8IWF9 413 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 NSUN6Q8TEA1 469 aaKnown RBP10.18□□□□□ -0.78
DDX56-211ENST00000479602 PHKBQ93100 1093 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 PSTPIP2Q9H939 334 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 DDX41Q9UJV9 622 aaKnown RBP10.18□□□□□ -0.78
DDX56-211ENST00000479602 PCDHA4Q9UN74 947 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 SLC4A7Q9Y6M7 1214 aa10.18□□□□□ -0.78
DDX56-211ENST00000479602 MORC2Q9Y6X9 1032 aaPredicted RBP10.18□□□□□ -0.78
DDX56-211ENST00000479602 HAS3O00219 553 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 MAFGO15525 162 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 CXCL10P02778 98 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 MMP1P03956 469 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 CYP3A4P08684 503 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 BMP1P13497 986 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 CIITAP33076 1130 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 ADCY7P51828 1080 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 NAPAP54920 295 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 PDE4DQ08499 809 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 STK3Q13188 491 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 BECN1Q14457 450 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 NIPA1Q7RTP0 329 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 HEATR3Q7Z4Q2 680 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 REXO1Q8N1G1 1221 aaKnown RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 CMTR1Q8N1G2 835 aaKnown RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 OR6J1Q8NGC5 347 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 DHX38Q92620 1227 aaKnown RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 TNFRSF25Q93038 417 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 MTIF3Q9H2K0 278 aaKnown RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 FOXP1Q9H334 677 aaPredicted RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 EHMT1Q9H9B1 1298 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 SLC28A3Q9HAS3 691 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 ISY1Q9ULR0 285 aaKnown RBP10.17□□□□□ -0.78
DDX56-211ENST00000479602 KIAA1217Q5T5P2 1943 aa10.17□□□□□ -0.78
DDX56-211ENST00000479602 EIF3JO75822 258 aaKnown RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 ARHGEF15O94989 841 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 MMP3P08254 477 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 MYL3P08590 195 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 ATP2A2P16615 1042 aaKnown RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 U2AF2P26368 475 aaKnown RBP eCLIP10.16□□□□□ -0.78
DDX56-211ENST00000479602 TRAPPC10P48553 1259 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 LY6KQ17RY6 165 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 TRIM71Q2Q1W2 868 aaKnown RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 USH1GQ495M9 461 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 PCNX4Q63HM2 1172 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 VSIG10LQ86VR7 867 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 AFG1LQ8WV93 481 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 MBOAT7Q96N66 472 aa10.16□□□□□ -0.78
DDX56-211ENST00000479602 INPP4AQ96PE3 977 aaPredicted RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 NAP1L4Q99733 375 aaKnown RBP10.16□□□□□ -0.78
DDX56-211ENST00000479602 PDCD2LQ9BRP1 358 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms