RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 CYB5R4Q7L1T6 521 aa15.4■□□□□ 0.06
ABCF1-206ENST00000479542 SPRED2Q7Z698 418 aa15.4■□□□□ 0.06
ABCF1-206ENST00000479542 ATP6V0A1Q93050 837 aa15.4■□□□□ 0.06
ABCF1-206ENST00000479542 MRPL38Q96DV4 380 aaKnown RBP15.4■□□□□ 0.06
ABCF1-206ENST00000479542 RNPEPQ9H4A4 650 aa15.4■□□□□ 0.06
ABCF1-206ENST00000479542 UBE2ZQ9H832 354 aaPredicted RBP15.4■□□□□ 0.06
ABCF1-206ENST00000479542 SIP14410 1827 aa15.4■□□□□ 0.06
ABCF1-206ENST00000479542 ERICH2A1L162 156 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 CYTH3O43739 400 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 LGALS2P05162 132 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 HOXA13P31271 388 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-206ENST00000479542 COL19A1Q14993 1142 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 SART3Q15020 963 aaKnown RBP15.39■□□□□ 0.05
ABCF1-206ENST00000479542 TMEM31Q5JXX7 168 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
ABCF1-206ENST00000479542 FAM43BQ6ZT52 329 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-206ENST00000479542 GIMAP8Q8ND71 665 aaPredicted RBP15.39■□□□□ 0.05
ABCF1-206ENST00000479542 GDPD5Q8WTR4 605 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 RUFY2Q8WXA3 655 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 SEPT8Q92599 483 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 FAM122AQ96E09 287 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 PIGSQ96S52 555 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 LRFN3Q9BTN0 628 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 EPHX3Q9H6B9 360 aa15.39■□□□□ 0.05
ABCF1-206ENST00000479542 H3BNC9 293 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 FIBPO43427 364 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 CYP21A2P08686 494 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 SMIM10L2AP0DMW4 78 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 SMIM10L2BP0DMW5 78 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 THPOP40225 353 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
ABCF1-206ENST00000479542 PTPROQ16827 1216 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 TMCO2Q7Z6W1 182 aaPredicted RBP15.38■□□□□ 0.05
ABCF1-206ENST00000479542 FAM178BQ8IXR5 827 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 FBXO22Q8NEZ5 403 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 IL31RAQ8NI17 732 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 MICAL3Q7RTP6 2002 aa15.38■□□□□ 0.05
ABCF1-206ENST00000479542 IFIT3O14879 490 aaKnown RBP15.37■□□□□ 0.05
ABCF1-206ENST00000479542 TREHO43280 583 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 NCK2O43639 380 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 RPLP2P05387 115 aaKnown RBP15.37■□□□□ 0.05
ABCF1-206ENST00000479542 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
ABCF1-206ENST00000479542 EPC2Q52LR7 807 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 TIGD5Q53EQ6 642 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 PCNX4Q63HM2 1172 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 TEX2Q8IWB9 1127 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 MYOCDQ8IZQ8 938 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 NCOA7Q8NI08 942 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 GPR20Q99678 358 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 ZNF215Q9UL58 517 aaPredicted RBP15.37■□□□□ 0.05
ABCF1-206ENST00000479542 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
ABCF1-206ENST00000479542 NRCAMQ92823 1304 aa15.37■□□□□ 0.05
ABCF1-206ENST00000479542 NOP56O00567 594 aaKnown RBP15.36■□□□□ 0.05
ABCF1-206ENST00000479542 MAFGO15525 162 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 RB1P06400 928 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 WTAPQ15007 396 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 FCHSD1Q86WN1 690 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 TMTC2Q8N394 836 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.36■□□□□ 0.05
ABCF1-206ENST00000479542 EXOC6Q8TAG9 804 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 IGDCC4Q8TDY8 1250 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 IL25Q9H293 177 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 HCN4Q9Y3Q4 1203 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 RWDD3Q9Y3V2 267 aa15.36■□□□□ 0.05
ABCF1-206ENST00000479542 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
ABCF1-206ENST00000479542 GRXCR2A6NFK2 248 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 C5orf67F2Z3F1 127 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 SEMA3FQ13275 785 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 TTC22Q5TAA0 569 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 TAF2Q6P1X5 1199 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 CATIPQ7Z7H3 387 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 RALYLQ86SE5 291 aaKnown RBP15.35■□□□□ 0.05
ABCF1-206ENST00000479542 HOMER1Q86YM7 354 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 GPKOWQ92917 476 aaPredicted RBP eCLIP15.35■□□□□ 0.05
ABCF1-206ENST00000479542 CDHR1Q96JP9 859 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 EHMT1Q9H9B1 1298 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 RAPGEFL1Q9UHV5 662 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 FAM50BQ9Y247 325 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 SQORQ9Y6N5 450 aa15.35■□□□□ 0.05
ABCF1-206ENST00000479542 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
ABCF1-206ENST00000479542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.34■□□□□ 0.05
ABCF1-206ENST00000479542 E7EWF7 191 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 DDAH1O94760 285 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 CHMLP26374 656 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 KIF5BP33176 963 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 GNAQP50148 359 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 NLRX1Q86UT6 975 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 TMEM192Q8IY95 271 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 GJD3Q8N144 294 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 MAP4K1Q92918 833 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 CUL5Q93034 780 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 GPRASP2Q96D09 838 aa15.34■□□□□ 0.05
ABCF1-206ENST00000479542 PABPC5Q96DU9 382 aaKnown RBP15.34■□□□□ 0.05
ABCF1-206ENST00000479542 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms