RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 DBX2Q6ZNG2 339 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 USP53Q70EK8 1073 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 CKAP2LQ8IYA6 745 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 IFNL3Q8IZI9 196 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 LGI4Q8N135 537 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 UHMK1Q8TAS1 419 aaKnown RBP5.31□□□□□ -1.56
SPC25-204ENST00000479309 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.31□□□□□ -1.562e-7■□□□□ 10.9
SPC25-204ENST00000479309 TMEM209Q96SK2 561 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
SPC25-204ENST00000479309 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.56
SPC25-204ENST00000479309 EPHA5P54756 1037 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 STK32CQ86UX6 486 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 FAM124AQ86V42 546 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 PROSER1Q86XN7 944 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 DDX1Q92499 740 aaKnown RBP5.3□□□□□ -1.56
SPC25-204ENST00000479309 ARMC5Q96C12 935 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 LCORQ96JN0 433 aaPredicted RBP5.3□□□□□ -1.56
SPC25-204ENST00000479309 YTHDC1Q96MU7 727 aaKnown RBP5.3□□□□□ -1.56
SPC25-204ENST00000479309 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 CLIC6Q96NY7 704 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 SPATA9Q9BWV2 254 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 JAM3Q9BX67 310 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 TRIM55Q9BYV6 548 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 PPARGC1AQ9UBK2 798 aaKnown RBP5.3□□□□□ -1.56
SPC25-204ENST00000479309 NUB1Q9Y5A7 615 aa5.3□□□□□ -1.56
SPC25-204ENST00000479309 K7ESM1 405 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 WNT9AO14904 365 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 PDPK1O15530 556 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 ADCY3O60266 1144 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 PLATP00750 562 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 CHGBP05060 677 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 GRK2P25098 689 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 IL13P35225 146 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 GRK3P35626 688 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 SPIRE1Q08AE8 756 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 IFRD2Q12894 506 aaPredicted RBP5.29□□□□□ -1.56
SPC25-204ENST00000479309 LONRF2Q1L5Z9 754 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
SPC25-204ENST00000479309 MCTP2Q6DN12 878 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 PKN3Q6P5Z2 889 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 BORAQ6PGQ7 559 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 KCNT2Q6UVM3 1135 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 SCUBE1Q8IWY4 988 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 PIP4K2CQ8TBX8 421 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 MBD6Q96DN6 1003 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 BORCS6Q96GS4 357 aa5.29□□□□□ -1.56
SPC25-204ENST00000479309 SSBP3Q9BWW4 388 aaPredicted RBP5.29□□□□□ -1.56
SPC25-204ENST00000479309 MLLT6P55198 1093 aaPredicted RBP5.28□□□□□ -1.56
SPC25-204ENST00000479309 SURF1Q15526 300 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 YOD1Q5VVQ6 348 aaPredicted RBP5.28□□□□□ -1.56
SPC25-204ENST00000479309 HHIPL2Q6UWX4 724 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 MAMDC2Q7Z304 686 aaPredicted RBP5.28□□□□□ -1.56
SPC25-204ENST00000479309 LRP10Q7Z4F1 713 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 SAMD11Q96NU1 681 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 SIRPGQ9P1W8 387 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 INVSQ9Y283 1065 aa5.28□□□□□ -1.56
SPC25-204ENST00000479309 FAM47E-STBD1D6RA91 191 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 SLC27A2O14975 620 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 U2SURPO15042 1029 aaKnown RBP5.27□□□□□ -1.57
SPC25-204ENST00000479309 SOD2P04179 222 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 COL6A1P12109 1028 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 FAHP16930 419 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 MAGEA10P43363 369 aaPredicted RBP5.27□□□□□ -1.57
SPC25-204ENST00000479309 RBL2Q08999 1139 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 SPATC1Q76KD6 591 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 ASXL2Q76L83 1435 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 ZBTB38Q8NAP3 1195 aaPredicted RBP5.27□□□□□ -1.57
SPC25-204ENST00000479309 ZCCHC14Q8WYQ9 949 aaKnown RBP5.27□□□□□ -1.57
SPC25-204ENST00000479309 C1QTNF3Q9BXJ4 246 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 DLL4Q9NR61 685 aa5.27□□□□□ -1.57
SPC25-204ENST00000479309 B4GALT3O60512 393 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 GNAT1P11488 350 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 ATP2B1P20020 1258 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 TUSC3Q13454 348 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 SERINC3Q13530 473 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 PAN2Q504Q3 1202 aaKnown RBP5.26□□□□□ -1.57
SPC25-204ENST00000479309 ZC3H12BQ5HYM0 836 aaKnown RBP5.26□□□□□ -1.57
SPC25-204ENST00000479309 PRAMEF18Q5VWM3 479 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 PLEKHH3Q7Z736 793 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 KLHL36Q8N4N3 616 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 PTPRN2Q92932 1015 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 HIRIP3Q9BW71 556 aaPredicted RBP5.26□□□□□ -1.57
SPC25-204ENST00000479309 TMEM168Q9H0V1 697 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 L2HGDHQ9H9P8 463 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 DSEQ9UL01 958 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 TELO2Q9Y4R8 837 aa5.26□□□□□ -1.57
SPC25-204ENST00000479309 BLACEA4D250 179 aa5.25□□□□□ -1.57
SPC25-204ENST00000479309 AQP7O14520 342 aa5.25□□□□□ -1.57
SPC25-204ENST00000479309 NKRFO15226 690 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPC25-204ENST00000479309 C6orf222P0C671 652 aaPredicted RBP5.25□□□□□ -1.57
SPC25-204ENST00000479309 SUMO1P63165 101 aaKnown RBP5.25□□□□□ -1.57
SPC25-204ENST00000479309 ZNF827Q17R98 1081 aa5.25□□□□□ -1.57
SPC25-204ENST00000479309 KCTD1Q719H9 257 aa5.25□□□□□ -1.57
SPC25-204ENST00000479309 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.25□□□□□ -1.57
SPC25-204ENST00000479309 ALG1Q9BT22 464 aa5.25□□□□□ -1.57
SPC25-204ENST00000479309 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms