RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 ZNF200P98182 395 aaPredicted RBP23.42■■□□□ 1.34
TRIM8-203ENST00000479004 WWC2Q6AWC2 1192 aa23.42■■□□□ 1.34
TRIM8-203ENST00000479004 LRRC8DQ7L1W4 858 aa23.42■■□□□ 1.34
TRIM8-203ENST00000479004 FTOQ9C0B1 505 aaKnown RBP eCLIP23.42■■□□□ 1.34
TRIM8-203ENST00000479004 TUT1Q9H6E5 874 aaKnown RBP23.42■■□□□ 1.34
TRIM8-203ENST00000479004 PCDHA6Q9UN73 950 aa23.42■■□□□ 1.34
TRIM8-203ENST00000479004 YBX2Q9Y2T7 364 aaKnown RBP23.42■■□□□ 1.34
TRIM8-203ENST00000479004 PCDHA8Q9Y5H6 950 aa23.42■■□□□ 1.34
TRIM8-203ENST00000479004 SNX14Q9Y5W7 946 aa23.42■■□□□ 1.34
TRIM8-203ENST00000479004 SPDYE3A6NKU9 549 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 GOLGA8AA7E2F4 631 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 GOLGA8BA8MQT2 603 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 CPA1P15085 419 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 ATP2A2P16615 1042 aaKnown RBP23.41■■□□□ 1.34
TRIM8-203ENST00000479004 RABGGTBP53611 331 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 TRIM71Q2Q1W2 868 aaKnown RBP23.41■■□□□ 1.34
TRIM8-203ENST00000479004 TYW1BQ6NUM6 668 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 MAFAQ8NHW3 353 aaPredicted RBP23.41■■□□□ 1.34
TRIM8-203ENST00000479004 GPRASP2Q96D09 838 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 USP26Q9BXU7 913 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 NKX2-4Q9H2Z4 354 aa23.41■■□□□ 1.34
TRIM8-203ENST00000479004 V9GY48 417 aaPredicted RBP23.41■■□□□ 1.34
TRIM8-203ENST00000479004 EPB41L2O43491 1005 aaKnown RBP23.4■■□□□ 1.34
TRIM8-203ENST00000479004 PARNO95453 639 aaKnown RBP23.4■■□□□ 1.34
TRIM8-203ENST00000479004 ITGB5P18084 799 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 CDC27P30260 824 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 Q6ZUG5 572 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 GIMAP8Q8ND71 665 aaPredicted RBP23.4■■□□□ 1.34
TRIM8-203ENST00000479004 WNT8BQ93098 351 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 JAKMIP1Q96N16 626 aaKnown RBP23.4■■□□□ 1.34
TRIM8-203ENST00000479004 CHD7Q9P2D1 2997 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 TELO2Q9Y4R8 837 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 PCDHA11Q9Y5I1 949 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 UBIAD1Q9Y5Z9 338 aa23.4■■□□□ 1.34
TRIM8-203ENST00000479004 ATP9AO75110 1047 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 HOXC8P31273 242 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 NAPAP54920 295 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 FGD1P98174 961 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 PPP1R18Q6NYC8 613 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 TRAF7Q6Q0C0 670 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 TEX2Q8IWB9 1127 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 PHOSPHO2Q8TCD6 241 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 CDHR1Q96JP9 859 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 RIC8AQ9NPQ8 531 aa23.39■■□□□ 1.33
TRIM8-203ENST00000479004 C17orf102A2RUQ5 167 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 hCG_1984214I3L0E3 225 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 NBNO60934 754 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 BAIAP3O94812 1187 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 CXCL10P02778 98 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 SMIM10L2AP0DMW4 78 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 SMIM10L2BP0DMW5 78 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 KCNA2P16389 499 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 ADD1P35611 737 aaKnown RBP23.38■■□□□ 1.33
TRIM8-203ENST00000479004 APOBRQ0VD83 1088 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 BLOC1S2Q6QNY1 142 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 FBXL16Q8N461 479 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 ZNF713Q8N859 430 aaPredicted RBP23.38■■□□□ 1.33
TRIM8-203ENST00000479004 SLC9A7Q96T83 725 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 SLC28A3Q9HAS3 691 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 JADE2Q9NQC1 790 aa23.38■■□□□ 1.33
TRIM8-203ENST00000479004 STXBP3O00186 592 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 MYOGP15173 224 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 METAP2P50579 478 aaKnown RBP eCLIP23.37■■□□□ 1.33
TRIM8-203ENST00000479004 ZNF618Q5T7W0 954 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 SERINC5Q86VE9 423 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.37■■□□□ 1.33
TRIM8-203ENST00000479004 RNPEPQ9H4A4 650 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 EHMT1Q9H9B1 1298 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
TRIM8-203ENST00000479004 NAP1L2Q9ULW6 460 aaPredicted RBP23.37■■□□□ 1.33
TRIM8-203ENST00000479004 PTPRSQ13332 1948 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 MAFGO15525 162 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 RPS6KB1P23443 525 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 SP4Q02446 784 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 MTMR1Q13613 665 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 C8orf34Q49A92 452 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 UTP14CQ5TAP6 766 aaKnown RBP23.36■■□□□ 1.33
TRIM8-203ENST00000479004 BRF1Q92994 677 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 ATP6V0A1Q93050 837 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 AGXT2Q9BYV1 514 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 PRDM12Q9H4Q4 367 aa23.36■■□□□ 1.33
TRIM8-203ENST00000479004 ZNF215Q9UL58 517 aaPredicted RBP23.36■■□□□ 1.33
TRIM8-203ENST00000479004 CCDC196A0A1B0GTZ2 297 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 SMCO2A6NFE2 343 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 TREHO43280 583 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 FOSP01100 380 aaPredicted RBP23.35■■□□□ 1.33
TRIM8-203ENST00000479004 ADCY7P51828 1080 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 CNKSR3Q6P9H4 555 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 TRIM50Q86XT4 487 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 GAS2L1Q99501 681 aaPredicted RBP23.35■■□□□ 1.33
TRIM8-203ENST00000479004 NID2Q14112 1375 aa23.35■■□□□ 1.33
TRIM8-203ENST00000479004 PSMA5P28066 241 aa23.34■■□□□ 1.33
TRIM8-203ENST00000479004 TCF7P36402 384 aaPredicted RBP23.34■■□□□ 1.33
TRIM8-203ENST00000479004 CLK2P49760 499 aaKnown RBP23.34■■□□□ 1.33
TRIM8-203ENST00000479004 MBTPS1Q14703 1052 aa23.34■■□□□ 1.33
TRIM8-203ENST00000479004 PFKFB3Q16875 520 aaPredicted RBP23.34■■□□□ 1.33
TRIM8-203ENST00000479004 PPP2R2DQ66LE6 453 aa23.34■■□□□ 1.33
TRIM8-203ENST00000479004 HERC6Q8IVU3 1022 aa23.34■■□□□ 1.33
TRIM8-203ENST00000479004 SEPT1Q8WYJ6 367 aa23.34■■□□□ 1.33
TRIM8-203ENST00000479004 MXRA8Q9BRK3 442 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms