RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 NPLOC4Q8TAT6 608 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 KCTD13Q8WZ19 329 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 DPF3Q92784 378 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 DVL3Q92997 716 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 KISS1RQ969F8 398 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 CCDC140Q96MF4 163 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 C8orf49Q96NF6 230 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 SYT3Q9BQG1 590 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 TMEM168Q9H0V1 697 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 EPB41L1Q9H4G0 881 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 SPATA6Q9NWH7 488 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 DTLQ9NZJ0 730 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 MYOTQ9UBF9 498 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 PPP1R1BQ9UD71 204 aaPredicted RBP2.3□□□□□ -2.04
SRRM1-211ENST00000478890 PRKAG3Q9UGI9 489 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 INVSQ9Y283 1065 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF652Q9Y2D9 606 aa2.3□□□□□ -2.04
SRRM1-211ENST00000478890 NPEPPSL1A6NEC2 478 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 LAMTOR5O43504 91 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 FBXO21O94952 628 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 GJB6O95452 261 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 GNAT1P11488 350 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 TCF3P15923 654 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 IL12RB1P42701 662 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ARID5AQ03989 594 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 SURF1Q15526 300 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 SF1Q15637 639 aaKnown RBP2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF568Q3ZCX4 644 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 VASNQ6EMK4 673 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 DPY19L2P1Q6NXN4 242 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ARHGEF18Q6ZSZ5 1173 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 EP400NLQ6ZTU2 488 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 CCDC103Q8IW40 242 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 IFNL2Q8IZJ0 200 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 TMEM145Q8NBT3 493 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 RCBTB1Q8NDN9 531 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 MRGPRX3Q96LB0 322 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 TMEM209Q96SK2 561 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 IER2Q9BTL4 223 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 TRIM55Q9BYV6 548 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 BARX1Q9HBU1 254 aaPredicted RBP2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ST7Q9NRC1 585 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 KIAA1522Q9P206 1035 aaPredicted RBP2.29□□□□□ -2.04
SRRM1-211ENST00000478890 TMEFF2Q9UIK5 374 aaPredicted RBP2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ST6GALNAC2Q9UJ37 374 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 FBXL7Q9UJT9 491 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 ZDHHC9Q9Y397 364 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 NUB1Q9Y5A7 615 aa2.29□□□□□ -2.04
SRRM1-211ENST00000478890 UNCXA6NJT0 531 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 H7BY64 318 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 U2SURPO15042 1029 aaKnown RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 APPP05067 770 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 LCP1P13796 627 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 GRK2P25098 689 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 GRK3P35626 688 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 ETFBP38117 255 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 GFRA1P56159 465 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 PPP2R2AP63151 447 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 GRIN1Q05586 938 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 FHL2Q14192 279 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 SLC10A6Q3KNW5 377 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 TBC1D10BQ4KMP7 808 aaPredicted RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 ACBD5Q5T8D3 534 aaPredicted RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 MRM1Q6IN84 353 aaKnown RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 TEPPQ6URK8 271 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 LIMS2Q7Z4I7 341 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 RALYLQ86SE5 291 aaKnown RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 CIR1Q86X95 450 aaPredicted RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 PALM2Q8IXS6 379 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF513Q8N8E2 541 aaPredicted RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 ARRDC4Q8NCT1 418 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 PIP4K2CQ8TBX8 421 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 PHOSPHO1Q8TCT1 267 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 HNRNPLLQ8WVV9 542 aaKnown RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 CHFRQ96EP1 664 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 KCNJ15Q99712 375 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 PHF20Q9BVI0 1012 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 EPN3Q9H201 632 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 DEF6Q9H4E7 631 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 ZNF408Q9H9D4 720 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 CCDC9Q9Y3X0 531 aaKnown RBP2.28□□□□□ -2.04
SRRM1-211ENST00000478890 X6R8D5 127 aa2.28□□□□□ -2.04
SRRM1-211ENST00000478890 TCRBV5S2A0A599 114 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 IQCA1LA6NCM1 817 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 C9orf118A6NHY6 69 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 CCDC85CA6NKD9 419 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 PROB1E7EW31 1015 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 SLC27A2O14975 620 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 B4GALT4O60513 344 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 SCG5P05408 212 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 ZNF28P17035 718 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 IL13P35225 146 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 GLRBP48167 497 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 SPIRE1Q08AE8 756 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 MAP4K2Q12851 820 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 IFRD2Q12894 506 aaPredicted RBP2.27□□□□□ -2.05
SRRM1-211ENST00000478890 ADAM9Q13443 819 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 HSP90AA2PQ14568 343 aaPredicted RBP2.27□□□□□ -2.05
SRRM1-211ENST00000478890 KIZQ2M2Z5 673 aa2.27□□□□□ -2.05
SRRM1-211ENST00000478890 CR1LQ2VPA4 569 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms