RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SIP14410 1827 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 DTNBO60941 627 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 LGALS2P05162 132 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 PPIGQ13427 754 aaKnown RBP eCLIP21.52■■□□□ 1.042e-10■■■■□ 26
SREBF1-212ENST00000478616 KIAA0753Q2KHM9 967 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 GNPTABQ3T906 1256 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 TRIM50Q86XT4 487 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 TMEM199Q8N511 208 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-212ENST00000478616 GPRASP2Q96D09 838 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 RNPC3Q96LT9 517 aaKnown RBP21.52■■□□□ 1.04
SREBF1-212ENST00000478616 ALG1Q9BT22 464 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 ZMYND12Q9H0C1 365 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 JADE2Q9NQC1 790 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 MTMR10Q9NXD2 777 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 CYP46A1Q9Y6A2 500 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 CHD9Q3L8U1 2897 aa21.52■■□□□ 1.04
SREBF1-212ENST00000478616 ESYT2A0FGR8 921 aa21.51■■□□□ 1.03
SREBF1-212ENST00000478616 ADCY7P51828 1080 aa21.51■■□□□ 1.03
SREBF1-212ENST00000478616 CHMP4BP1P59074 171 aa21.51■■□□□ 1.03
SREBF1-212ENST00000478616 TTYH1Q9H313 450 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-212ENST00000478616 MLXIPQ9HAP2 919 aa21.51■■□□□ 1.03
SREBF1-212ENST00000478616 KAT6AQ92794 2004 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 CCDC196A0A1B0GTZ2 297 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 GSTTP1A0A1W2PQM5 241 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 SPDYE3A6NKU9 549 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 GRXCR1A8MXD5 290 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 IQCF3P0C7M6 154 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 SUPT20HL2P0C7V6 817 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 ARP10275 920 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 SREBF1P36956 1147 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 RBL2Q08999 1139 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 NEDD9Q14511 834 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 PTGISQ16647 500 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 ZNF274Q96GC6 653 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-212ENST00000478616 GUCD1Q96NT3 240 aa21.5■■□□□ 1.03
SREBF1-212ENST00000478616 RNF26Q9BY78 433 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-212ENST00000478616 SMAD3P84022 425 aaKnown RBP21.49■■□□□ 1.03
SREBF1-212ENST00000478616 ITGB3BPQ13352 177 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-212ENST00000478616 NPY5RQ15761 445 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 TCTN1Q2MV58 587 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 JAKMIP3Q5VZ66 844 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 DEFB123Q8N688 67 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 RASGRP4Q8TDF6 673 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 HERVK_113Q902F9 699 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 MXRA8Q9BRK3 442 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 PDRG1Q9NUG6 133 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 PKD2L1Q9P0L9 805 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 TPCN1Q9ULQ1 816 aa21.49■■□□□ 1.03
SREBF1-212ENST00000478616 IGLV3-22A0A075B6J6 115 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 FAM86B1E9PN63 330 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 PITPNM1O00562 1244 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 FAM86B2P0C5J1 330 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 ADAM17P78536 824 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 NLRX1Q86UT6 975 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 TEX2Q8IWB9 1127 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 AIFM3Q96NN9 605 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 PCYT2Q99447 389 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 SLC26A6Q9BXS9 759 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 KCNH7Q9NS40 1196 aa21.48■■□□□ 1.03
SREBF1-212ENST00000478616 H3BRB1 525 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 MEIS1O00470 390 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 PBX2P40425 430 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 ANAPC15P60006 121 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 SP4Q02446 784 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 SCRN1Q12765 414 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 AP3B2Q13367 1082 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 MTMR1Q13613 665 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 MBTPS1Q14703 1052 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 PSRC1Q6PGN9 363 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-212ENST00000478616 OSBPL7Q9BZF2 842 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 TUT1Q9H6E5 874 aaKnown RBP21.47■■□□□ 1.03
SREBF1-212ENST00000478616 VPS54Q9P1Q0 977 aa21.47■■□□□ 1.03
SREBF1-212ENST00000478616 LARGE1O95461 756 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 FOSP01100 380 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-212ENST00000478616 SMIM10L2AP0DMW4 78 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 SMIM10L2BP0DMW5 78 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 ARHGAP4P98171 946 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 STK3Q13188 491 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 OTOP2Q7RTS6 562 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 C7orf31Q8N865 590 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 KATNAL1Q9BW62 490 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 RNPEPQ9H4A4 650 aa21.46■■□□□ 1.03
SREBF1-212ENST00000478616 M0R2N6 131 aa21.45■■□□□ 1.02
SREBF1-212ENST00000478616 CYP3A4P08684 503 aa21.45■■□□□ 1.02
SREBF1-212ENST00000478616 C8orf34Q49A92 452 aa21.45■■□□□ 1.02
SREBF1-212ENST00000478616 CEP55Q53EZ4 464 aa21.45■■□□□ 1.02
SREBF1-212ENST00000478616 DEFB128Q7Z7B8 93 aa21.45■■□□□ 1.02
SREBF1-212ENST00000478616 AGO4Q9HCK5 861 aaKnown RBP21.45■■□□□ 1.02
SREBF1-212ENST00000478616 CHD7Q9P2D1 2997 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 DHX15O43143 795 aaKnown RBP21.44■■□□□ 1.02
SREBF1-212ENST00000478616 TREHO43280 583 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 NBNO60934 754 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 FGBP02675 491 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 CKBP12277 381 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 TCF7P36402 384 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-212ENST00000478616 AK2P54819 239 aa21.44■■□□□ 1.02
SREBF1-212ENST00000478616 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms