RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 RAG1P15918 1043 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 HMGN5P82970 282 aaKnown RBP9.04□□□□□ -0.96
DDX39B-218ENST00000478365 ARHGAP4P98171 946 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 SCRN1Q12765 414 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 STK3Q13188 491 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 TRIM29Q14134 588 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 KRT25Q7Z3Z0 450 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 FAM126BQ8IXS8 530 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 MXRA8Q9BRK3 442 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 LLPHQ9BRT6 129 aaKnown RBP9.04□□□□□ -0.96
DDX39B-218ENST00000478365 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
DDX39B-218ENST00000478365 TPCN1Q9ULQ1 816 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 PCDHA4Q9UN74 947 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 DDX49Q9Y6V7 483 aaKnown RBP9.04□□□□□ -0.96
DDX39B-218ENST00000478365 NFASCO94856 1347 aa9.04□□□□□ -0.96
DDX39B-218ENST00000478365 MEIS1O00470 390 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 TIMP1P01033 207 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 CIITAP33076 1130 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 MAGEA10P43363 369 aaPredicted RBP9.03□□□□□ -0.96
DDX39B-218ENST00000478365 USP11P51784 963 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 FAAP100Q0VG06 881 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 PPIGQ13427 754 aaKnown RBP eCLIP9.03□□□□□ -0.966e-20■■□□□ 12.7
DDX39B-218ENST00000478365 BFSP2Q13515 415 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 MOXD1Q6UVY6 613 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 BLIDQ8IZY5 108 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 TMEM199Q8N511 208 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 C7orf31Q8N865 590 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 CAGE1Q8TC20 777 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 COPS5Q92905 334 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 UBE2OQ9C0C9 1292 aaKnown RBP9.03□□□□□ -0.96
DDX39B-218ENST00000478365 MTIF3Q9H2K0 278 aaKnown RBP9.03□□□□□ -0.96
DDX39B-218ENST00000478365 PRO3102Q9H379 93 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 TBC1D22BQ9NU19 505 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 RTEL1Q9NZ71 1219 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 VPS54Q9P1Q0 977 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 ORC3Q9UBD5 711 aaPredicted RBP9.03□□□□□ -0.96
DDX39B-218ENST00000478365 TBX21Q9UL17 535 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 LTBP2Q14767 1821 aa9.03□□□□□ -0.96
DDX39B-218ENST00000478365 CCDC194A0A1B0GVG4 234 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 SEC24BO95487 1268 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 CD4P01730 458 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 PFKMP08237 780 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 ATXN8OSP0DMR3 200 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 GCFC2P16383 781 aaKnown RBP9.02□□□□□ -0.97
DDX39B-218ENST00000478365 KCNA2P16389 499 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 ITGB5P18084 799 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 RFC2P35250 354 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 PSEN2P49810 448 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 SLC26A2P50443 739 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 FPGSQ05932 587 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 MFSD10Q14728 455 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 NONOQ15233 471 aaKnown RBP eCLIP9.02□□□□□ -0.97
DDX39B-218ENST00000478365 ME3Q16798 604 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 NBPF20Q3BBV1 942 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 FAM47CQ5HY64 1035 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 JAKMIP3Q5VZ66 844 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 MFSD5Q6N075 450 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 FAM43BQ6ZT52 329 aaPredicted RBP9.02□□□□□ -0.97
DDX39B-218ENST00000478365 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 PLA2G4DQ86XP0 818 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 TDHQ8IZJ6 230 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 SEPT1Q8WYJ6 367 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 HIPK3Q9H422 1215 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 JPH1Q9HDC5 661 aaPredicted RBP9.02□□□□□ -0.97
DDX39B-218ENST00000478365 KCNH7Q9NS40 1196 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 SLC9A2Q9UBY0 812 aa9.02□□□□□ -0.97
DDX39B-218ENST00000478365 RANBP2P49792 3224 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 H3BRB1 525 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 HAS3O00219 553 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 CAND2O75155 1236 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 LGALS2P05162 132 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 SYN1P17600 705 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 KRT76Q01546 638 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 SP2Q02086 613 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 RBL2Q08999 1139 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 SAFBQ15424 915 aaKnown RBP eCLIP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 KIAA0753Q2KHM9 967 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 HSDL1Q3SXM5 330 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 HABP4Q5JVS0 413 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 PSRC1Q6PGN9 363 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 RETREG2Q8NC44 543 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 CRYGNQ8WXF5 182 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 TBC1D32Q96NH3 1257 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 GPR20Q99678 358 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 ALG1Q9BT22 464 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 PHF20Q9BVI0 1012 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 SMARCAD1Q9H4L7 1026 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 TUT1Q9H6E5 874 aaKnown RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 ERAP1Q9NZ08 941 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 GTF2IRD1Q9UHL9 959 aa9.01□□□□□ -0.97
DDX39B-218ENST00000478365 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-218ENST00000478365 GRIN2DO15399 1336 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms