RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 C16orf70Q9BSU1 422 aa16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
SMARCE1-209ENST00000478349 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 LGR5O75473 907 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 AMHP03971 560 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 POU3F3P20264 500 aaPredicted RBP16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 MRPS9P82933 396 aaKnown RBP16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 SP2Q02086 613 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 KRT32Q14532 448 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 CYFIP1Q7L576 1253 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 ARNTL2Q8WYA1 636 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 ASB2Q96Q27 587 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 RAD9AQ99638 391 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 MYH6P13533 1939 aa16.6■□□□□ 0.25
SMARCE1-209ENST00000478349 UNC80Q8N2C7 3258 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 KIAA1217Q5T5P2 1943 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 NBNO60934 754 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 TAP1Q03518 808 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 TMTC3Q6ZXV5 915 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 SGMS1Q86VZ5 419 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 MICU3Q86XE3 530 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 FANCBQ8NB91 859 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 SEPT8Q92599 483 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 TNPO1Q92973 898 aaKnown RBP16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 GPR20Q99678 358 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
SMARCE1-209ENST00000478349 MEIS2O14770 477 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 MAFGO15525 162 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 GJB5O95377 273 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 HOXC8P31273 242 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 NECTIN1Q15223 517 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 RSPH3Q86UC2 560 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 SRBD1Q8N5C6 995 aaKnown RBP16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 GLT8D2Q9H1C3 349 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 COG5Q9UP83 839 aa16.58■□□□□ 0.24
SMARCE1-209ENST00000478349 CDH23Q9H251 3354 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 NRCAMQ92823 1304 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 TNFRSF10AO00220 468 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 MTMR1Q13613 665 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 APBB2Q92870 758 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 ZFP91Q96JP5 570 aaPredicted RBP16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 NEK1Q96PY6 1258 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 CERS4Q9HA82 394 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 LMCD1Q9NZU5 365 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 INSL6Q9Y581 213 aa16.57■□□□□ 0.24
SMARCE1-209ENST00000478349 CDC45O75419 566 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 RXRAP19793 462 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 RCAN1P53805 252 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 DEFB103AP81534 67 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 FGD1P98174 961 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 SP4Q02446 784 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 UTP14CQ5TAP6 766 aaKnown RBP16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 RNPEPQ9H4A4 650 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 ERAP1Q9NZ08 941 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 MTCH2Q9Y6C9 303 aa16.56■□□□□ 0.24
SMARCE1-209ENST00000478349 ZBTB43O43298 467 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 FOSP01100 380 aaPredicted RBP16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 TCF7P36402 384 aaPredicted RBP16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 NAPAP54920 295 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 ARHGAP4P98171 946 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 GPNMBQ14956 572 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 RTN1Q16799 776 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 TRAF7Q6Q0C0 670 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 APOA5Q6Q788 366 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 MYOCDQ8IZQ8 938 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 ADAMTS19Q8TE59 1207 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 SEPT1Q8WYJ6 367 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 GLG1Q92896 1179 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
SMARCE1-209ENST00000478349 CHD9Q3L8U1 2897 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 TREHO43280 583 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 CTSHP09668 335 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 PPFIA1Q13136 1202 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 PLEKHG4Q58EX7 1191 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 TRIM50Q86XT4 487 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 DBF4BQ8NFT6 615 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms