RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TFF2Q03403 129 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 HIC1Q14526 733 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 SKIV2LQ15477 1246 aaKnown RBP15.01□□□□□ -0.01
ABCF3-212ENST00000478288 FCHSD1Q86WN1 690 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 MB21D2Q8IYB1 491 aaPredicted RBP15.01□□□□□ -0.01
ABCF3-212ENST00000478288 IGDCC4Q8TDY8 1250 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 SENP7Q9BQF6 1050 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 SENP2Q9HC62 589 aa15.01□□□□□ -0.01
ABCF3-212ENST00000478288 LINC01553A4QN01 128 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 RSPH10B2B2RC85 870 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 NOP56O00567 594 aaKnown RBP15□□□□□ -0.01
ABCF3-212ENST00000478288 RSPH10BP0C881 870 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 ANTXR2P58335 489 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 ZNF200P98182 395 aaPredicted RBP15□□□□□ -0.01
ABCF3-212ENST00000478288 TCTN1Q2MV58 587 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 PLEKHG4Q58EX7 1191 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 PCNX4Q63HM2 1172 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 GPKOWQ92917 476 aaPredicted RBP eCLIP15□□□□□ -0.01
ABCF3-212ENST00000478288 ATP6V0A1Q93050 837 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 HLA-CQ95604 372 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
ABCF3-212ENST00000478288 LZTS2Q9BRK4 669 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 INSL6Q9Y581 213 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 TAF6LQ9Y6J9 622 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 MYO7AQ13402 2215 aa15□□□□□ -0.01
ABCF3-212ENST00000478288 AMHP03971 560 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 SMIM10L2AP0DMW4 78 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 SMIM10L2BP0DMW5 78 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 GNAT1P11488 350 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 THPOP40225 353 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 HTRA4P83105 476 aaPredicted RBP14.99□□□□□ -0.01
ABCF3-212ENST00000478288 SEMA3FQ13275 785 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 KRT40Q6A162 431 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 CTCFLQ8NI51 663 aaPredicted RBP14.99□□□□□ -0.01
ABCF3-212ENST00000478288 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
ABCF3-212ENST00000478288 GPR20Q99678 358 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 LY9Q9HBG7 655 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 ZNF215Q9UL58 517 aaPredicted RBP14.99□□□□□ -0.01
ABCF3-212ENST00000478288 RALGAPA2Q2PPJ7 1873 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
ABCF3-212ENST00000478288 GNAQP50148 359 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 KCNQ1P51787 676 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 SPRED2Q7Z698 418 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 TMCO2Q7Z6W1 182 aaPredicted RBP14.98□□□□□ -0.01
ABCF3-212ENST00000478288 ZNF654Q8IZM8 581 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 TMTC2Q8N394 836 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 GIMAP8Q8ND71 665 aaPredicted RBP14.98□□□□□ -0.01
ABCF3-212ENST00000478288 DBF4BQ8NFT6 615 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 GDPD5Q8WTR4 605 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 CUL5Q93034 780 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 RRP36Q96EU6 259 aaKnown RBP14.98□□□□□ -0.01
ABCF3-212ENST00000478288 RNPEPQ9H4A4 650 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 SUGCTQ9HAC7 445 aa14.98□□□□□ -0.01
ABCF3-212ENST00000478288 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
ABCF3-212ENST00000478288 PIEZO1Q92508 2521 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 MEIS2O14770 477 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 TREHO43280 583 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 SORBS3O60504 671 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 ADAM17P78536 824 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 CYFIP1Q7L576 1253 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 RPAINQ86UA6 219 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 TEX2Q8IWB9 1127 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 SEPT8Q92599 483 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 APBB2Q92870 758 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 SAMD11Q96NU1 681 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
ABCF3-212ENST00000478288 RBM8AQ9Y5S9 174 aaKnown RBP14.97□□□□□ -0.01
ABCF3-212ENST00000478288 NRCAMQ92823 1304 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 CALM1P0DP23 149 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 CALM2P0DP24 149 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 CALM3P0DP25 149 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 COL9A1P20849 921 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 MCM5P33992 734 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 TTC3P53804 2025 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 FAM26DQ5JW98 314 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 CASC1Q6TDU7 716 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
ABCF3-212ENST00000478288 NLRX1Q86UT6 975 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 GPRASP2Q96D09 838 aa14.96□□□□□ -0.01
ABCF3-212ENST00000478288 ZFP91Q96JP5 570 aaPredicted RBP14.96□□□□□ -0.01
ABCF3-212ENST00000478288 NECAB3Q96P71 396 aaPredicted RBP14.96□□□□□ -0.01
ABCF3-212ENST00000478288 SH2B2O14492 632 aaPredicted RBP14.95□□□□□ -0.02
ABCF3-212ENST00000478288 PRC1O43663 620 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 LIFRP42702 1097 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 USP17L6PQ6QN14 398 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 MYOCDQ8IZQ8 938 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 TOP1MTQ969P6 601 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 BCAS3Q9H6U6 928 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
ABCF3-212ENST00000478288 SUPT16HQ9Y5B9 1047 aaKnown RBP14.95□□□□□ -0.02
ABCF3-212ENST00000478288 KCNA2P16389 499 aa14.94□□□□□ -0.02
ABCF3-212ENST00000478288 TAF2Q6P1X5 1199 aa14.94□□□□□ -0.02
ABCF3-212ENST00000478288 TRIM50Q86XT4 487 aa14.94□□□□□ -0.02
ABCF3-212ENST00000478288 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
ABCF3-212ENST00000478288 FBXO22Q8NEZ5 403 aa14.94□□□□□ -0.02
ABCF3-212ENST00000478288 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms