RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
SNX21-210ENST00000478230 SDF4Q9BRK5 362 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 ALG1Q9BT22 464 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 IL23AQ9NPF7 189 aa17.22■□□□□ 0.35
SNX21-210ENST00000478230 TRIOBPQ9H2D6 2365 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 SCN10AQ9Y5Y9 1956 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 H3BRB1 525 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 HAS3O00219 553 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 CSF2RAP15509 400 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 ITGB5P18084 799 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 NLRP5P59047 1200 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 CEP55Q53EZ4 464 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 TYW1BQ6NUM6 668 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 SEPT1Q8WYJ6 367 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 WASF1Q92558 559 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 TUT1Q9H6E5 874 aaKnown RBP17.21■□□□□ 0.35
SNX21-210ENST00000478230 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
SNX21-210ENST00000478230 TRMT13Q9NUP7 481 aaKnown RBP17.21■□□□□ 0.35
SNX21-210ENST00000478230 GTF2IRD1Q9UHL9 959 aa17.21■□□□□ 0.35
SNX21-210ENST00000478230 FGBP02675 491 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 CYP3A4P08684 503 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 ZNF286BP0CG31 522 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 SMAD3P84022 425 aaKnown RBP17.2■□□□□ 0.34
SNX21-210ENST00000478230 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 STK3Q13188 491 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 GPR20Q99678 358 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 HDAC6Q9UBN7 1215 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 TCEAL9Q9UHQ7 104 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 NFASCO94856 1347 aa17.2■□□□□ 0.34
SNX21-210ENST00000478230 LTBP2Q14767 1821 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.19■□□□□ 0.34
SNX21-210ENST00000478230 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.19■□□□□ 0.34
SNX21-210ENST00000478230 SORBS3O60504 671 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 PFKFB2O60825 505 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 LGALS2P05162 132 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 CYP2C9P11712 490 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 CCL23P55773 120 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 SETQ01105 290 aaPredicted RBP17.19■□□□□ 0.34
SNX21-210ENST00000478230 PTK7Q13308 1070 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 C9orf50Q5SZB4 431 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 AFAP1L1Q8TED9 768 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 C16orf70Q9BSU1 422 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 KCNH7Q9NS40 1196 aa17.19■□□□□ 0.34
SNX21-210ENST00000478230 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 C17orf102A2RUQ5 167 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 MEIS1O00470 390 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 ACTN1P12814 892 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 KCNA2P16389 499 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 NEK4P51957 841 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 TMEM240Q5SV17 173 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 FAM109BQ6ICB4 259 aaPredicted RBP17.18■□□□□ 0.34
SNX21-210ENST00000478230 GDF6Q6KF10 455 aaPredicted RBP17.18■□□□□ 0.34
SNX21-210ENST00000478230 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 AZI2Q9H6S1 392 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
SNX21-210ENST00000478230 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
SNX21-210ENST00000478230 TMEM260Q9NX78 707 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 SLC9A2Q9UBY0 812 aa17.18■□□□□ 0.34
SNX21-210ENST00000478230 TCF7P36402 384 aaPredicted RBP17.17■□□□□ 0.34
SNX21-210ENST00000478230 USP11P51784 963 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 AK2P54819 239 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 SP4Q02446 784 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 UTP14CQ5TAP6 766 aaKnown RBP17.17■□□□□ 0.34
SNX21-210ENST00000478230 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 PLA2G4DQ86XP0 818 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 HERVK_113Q902F9 699 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 LRCH3Q96II8 777 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 PGBD1Q96JS3 809 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX21-210ENST00000478230 LARP6Q9BRS8 491 aaKnown RBP17.17■□□□□ 0.34
SNX21-210ENST00000478230 ERAP1Q9NZ08 941 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
SNX21-210ENST00000478230 SOX1O00570 391 aaPredicted RBP17.16■□□□□ 0.34
SNX21-210ENST00000478230 ATP9AO75110 1047 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 SELPP16109 830 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 EPHB4P54760 987 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 RBL2Q08999 1139 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 GLG1Q92896 1179 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 TBC1D22BQ9NU19 505 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 TPCN1Q9ULQ1 816 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 NRCAMQ92823 1304 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
SNX21-210ENST00000478230 CAND2O75155 1236 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 RPLP2P05387 115 aaKnown RBP17.15■□□□□ 0.34
SNX21-210ENST00000478230 IQCF3P0C7M6 154 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 SMIM10L2AP0DMW4 78 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 SMIM10L2BP0DMW5 78 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 SLC26A2P50443 739 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 SCRN1Q12765 414 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 BLIDQ8IZY5 108 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 ATP6V0A1Q93050 837 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 FTOQ9C0B1 505 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNX21-210ENST00000478230 WNT8AQ9H1J5 351 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 BCAS3Q9H6U6 928 aa17.15■□□□□ 0.34
SNX21-210ENST00000478230 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms