RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, human

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2B-208	ENST00000478188	CALML3	P27482	149 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	CNGA1	P29973	690 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	MAGEA10	P43363	369 aa	Predicted RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	EPHB4	P54760	987 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	PURA	Q00577	322 aa	Known RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	KRT32	Q14532	448 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	RASIP1	Q5U651	963 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	KIAA1211	Q6ZU35	1233 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	TMTC2	Q8N394	836 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	TOX2	Q96NM4	488 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	INPP4A	Q96PE3	977 aa	Predicted RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	BCAS3	Q9H6U6	928 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	ADD3	Q9UEY8	706 aa	Known RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	DDX41	Q9UJV9	622 aa	Known RBP	4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	PCDHA1	Q9Y5I3	950 aa		4.91	□□□□□ -1.62
POLR2B-208	ENST00000478188	LAMA2	P24043	3122 aa	Known RBP	4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	CDH23	Q9H251	3354 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	PTPDC1	A2A3K4	754 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	KBTBD13	C9JR72	458 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	ACTN4	O43707	911 aa	Known RBP	4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	HOXA13	P31271	388 aa	Predicted RBP	4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	APOBR	Q0VD83	1088 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	BLOC1S3	Q6QNY0	202 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188		Q6ZUG5	572 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	RUFY3	Q7L099	469 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	SESTD1	Q86VW0	696 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	MCF2L2	Q86YR7	1114 aa		4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	DAXX	Q9UER7	740 aa	Predicted RBP	4.9	□□□□□ -1.62
POLR2B-208	ENST00000478188	NKRF	O15226	690 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	NR3C2	P08235	984 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	MMP3	P08254	477 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	PDIA3	P30101	505 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	CLCN1	P35523	988 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	RBL2	Q08999	1139 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	GPNMB	Q14956	572 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	SART3	Q15020	963 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	FSCN1	Q16658	493 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	RNF20	Q5VTR2	975 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	CASC1	Q6TDU7	716 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	RNF180	Q86T96	592 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	TEX2	Q8IWB9	1127 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	JAKMIP1	Q96N16	626 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	RMDN3	Q96TC7	470 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	WDR11	Q9BZH6	1224 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	VAT1L	Q9HCJ6	419 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	RBM28	Q9NW13	759 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	UBIAD1	Q9Y5Z9	338 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	REV3L	O60673	3130 aa		4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.9	□□□□□ -1.63
POLR2B-208	ENST00000478188	MYH15	Q9Y2K3	1946 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	CEP290	O15078	2479 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	TET1	Q8NFU7	2136 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	KLF18	A0A0U1RQI7	1052 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	hCG_1642624	A0A1W2PR95	340 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ESYT2	A0FGR8	921 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ERICH2	A1L162	156 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	RBAK-RBAKDN	I3L0D1	243 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ARVCF	O00192	962 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	NR1I2	O75469	434 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	REC8	O95072	547 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	CTDNEP1	O95476	244 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	HMGB1	P09429	215 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	SYN1	P17600	705 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	EIF2AK2	P19525	551 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	UBA1	P22314	1058 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	TLE2	Q04725	743 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	PDE4D	Q08499	809 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	PFKFB3	Q16875	520 aa	Predicted RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	TRIM71	Q2Q1W2	868 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	PCNX4	Q63HM2	1172 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	C16orf59	Q7L2K0	433 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	EEPD1	Q7L9B9	569 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	MICU3	Q86XE3	530 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	HOMER1	Q86YM7	354 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	NSUN6	Q8TEA1	469 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	DHX38	Q92620	1227 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	FERMT2	Q96AC1	680 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	BARHL2	Q9NY43	387 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	SLC12A7	Q9Y666	1083 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188		A0A0U1RQG5	324 aa	Predicted RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	CCDC69	A6NI79	296 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	SPATA31C2	B4DYI2	1134 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ZBTB43	O43298	467 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	EIF3J	O75822	258 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	LARGE1	O95461	756 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	CFH	P08603	1231 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	KCNA2	P16389	499 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	KIF5B	P33176	963 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ADD1	P35611	737 aa	Known RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	SLC19A1	P41440	591 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	GNAQ	P50148	359 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	ANAPC15	P60006	121 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	RTN1	Q16799	776 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	LY6K	Q17RY6	165 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	USP17L6P	Q6QN14	398 aa		4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	CTCFL	Q8NI51	663 aa	Predicted RBP	4.89	□□□□□ -1.63
POLR2B-208	ENST00000478188	SCFD2	Q8WU76	684 aa		4.89	□□□□□ -1.63

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