RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 IGDCC4Q8TDY8 1250 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 STAG1Q8WVM7 1258 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 UBE2Q2Q8WVN8 375 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 SMARCC1Q92922 1105 aaPredicted RBP5.66□□□□□ -1.5
SF3B6-202ENST00000478050 NOL10Q9BSC4 688 aaKnown RBP5.66□□□□□ -1.5
SF3B6-202ENST00000478050 C7orf69Q9H7B7 122 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 EPB41L4AQ9HCS5 686 aaPredicted RBP5.66□□□□□ -1.5
SF3B6-202ENST00000478050 FAM13BQ9NYF5 915 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 KLK14Q9P0G3 267 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 SLC12A7Q9Y666 1083 aa5.66□□□□□ -1.5
SF3B6-202ENST00000478050 QSER1Q2KHR3 1735 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 TAF1LQ8IZX4 1826 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC196A0A1B0GTZ2 297 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 UNCXA6NJT0 531 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 GSG1L2A8MUP6 293 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 KIF2AO00139 706 aaPredicted RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 IKBKBO14920 756 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 NRDCO43847 1150 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 IGSF3O75054 1194 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 LGR5O75473 907 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 DEXIO95424 95 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 ABL1P00519 1130 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 PFKFB1P16118 471 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 U2AF2P26368 475 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CDC27P30260 824 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 SYKP43405 635 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 TDO2P48775 406 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 FXR1P51114 621 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 SEC13P55735 322 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 RBM10P98175 930 aaKnown RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 LRMPQ12912 555 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 DGKZQ13574 1117 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 WTAPQ15007 396 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 PPP2R5BQ15173 497 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 PTPAQ15257 358 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 SYCP1Q15431 976 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 RESP18Q5W5W9 173 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 TMED8Q6PL24 325 aaPredicted RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 ACAD11Q709F0 780 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 LRRC8AQ8IWT6 810 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC144CPQ8IYA2 1237 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CACTIN-AS1Q8N1I8 211 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CCDC150Q8NCX0 1101 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 CACTINQ8WUQ7 758 aaKnown RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 OSBPL5Q9H0X9 879 aaPredicted RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 ARMT1Q9H993 441 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 SEC31BQ9NQW1 1179 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 KCND1Q9NSA2 647 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 RNF181Q9P0P0 153 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 ADGRE2Q9UHX3 823 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 NRBP1Q9UHY1 535 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 HOOK1Q9UJC3 728 aaKnown RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 TUBE1Q9UJT0 475 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 NIP7Q9Y221 180 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 HPSEQ9Y251 543 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 PPME1Q9Y570 386 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 PAXBP1Q9Y5B6 917 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 SLC4A4Q9Y6R1 1079 aa5.65□□□□□ -1.5
SF3B6-202ENST00000478050 MORC2Q9Y6X9 1032 aaPredicted RBP5.65□□□□□ -1.5
SF3B6-202ENST00000478050 MYH1P12882 1939 aa5.65□□□□□ -1.51
SF3B6-202ENST00000478050 MROH7-TTC4A0A0A0MT08 1334 aa5.65□□□□□ -1.51
SF3B6-202ENST00000478050 BTAF1O14981 1849 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 NAV1Q8NEY1 1877 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 NHSQ6T4R5 1651 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 HMX2A2RU54 273 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CBFA2T2O43439 604 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 RANBP6O60518 1105 aaKnown RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 WDHD1O75717 1129 aaPredicted RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 MICAL2O94851 1124 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 MMP1P03956 469 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 PCP11498 1178 aaKnown RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 TNNT1P13805 278 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 RXRAP19793 462 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CYP7A1P22680 504 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 KCNJ6P48051 423 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 JAG1P78504 1218 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CHRNDQ07001 517 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 UBE4AQ14139 1066 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 TPD52L1Q16890 204 aaPredicted RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 DPCR1Q3MIW9 517 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 RILPL1Q5EBL4 403 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 OLFM4Q6UX06 510 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CLEC4GQ6UXB4 293 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 ARMC10Q8N2F6 343 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 LCORLQ8N3X6 602 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 PHKBQ93100 1093 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 AIFM3Q96NN9 605 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 NSUN5Q96P11 429 aaKnown RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 MAP3K14Q99558 947 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 SLC26A6Q9BXS9 759 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 FOXP1Q9H334 677 aaPredicted RBP5.64□□□□□ -1.51
SF3B6-202ENST00000478050 GJB4Q9NTQ9 266 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 ZSWIM5Q9P217 1185 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 LRP2BPQ9P2M1 347 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 ANAPC4Q9UJX5 808 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 DENND2AQ9ULE3 1009 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CEP131Q9UPN4 1083 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms