RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 Q6ZUG5 572 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 SGMS1Q86VZ5 419 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 DEFB123Q8N688 67 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 SLC43A3Q8NBI5 491 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 BRF1Q92994 677 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 SCLYQ96I15 445 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 PGBD1Q96JS3 809 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 ALG1Q9BT22 464 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 ALDH8A1Q9H2A2 487 aaPredicted RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
ERCC8-205ENST00000477893 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
ERCC8-205ENST00000477893 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-205ENST00000477893 NAPAP54920 295 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 SP2Q02086 613 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 GHRHRQ02643 423 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 PPIGQ13427 754 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-205ENST00000477893 WWC2Q6AWC2 1192 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 TMEM199Q8N511 208 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 SPATA33Q96N06 139 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-205ENST00000477893 NOC4LQ9BVI4 516 aaKnown RBP9.53□□□□□ -0.88
ERCC8-205ENST00000477893 BCAS3Q9H6U6 928 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
ERCC8-205ENST00000477893 RBM28Q9NW13 759 aaKnown RBP9.53□□□□□ -0.88
ERCC8-205ENST00000477893 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 PPP1R3GB7ZBB8 358 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 MEIS2O14770 477 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 HMGB1P09429 215 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 COL9A1P20849 921 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 CDC27P30260 824 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 MRPS9P82933 396 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 LAMC2Q13753 1193 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 DGKDQ16760 1214 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 TSGA10IPQ3SY00 556 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 GNPTABQ3T906 1256 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 NYAP1Q6ZVC0 841 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 DEFB128Q7Z7B8 93 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 LARP6Q9BRS8 491 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 MAF1Q9H063 256 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 WNT8AQ9H1J5 351 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.89
ERCC8-205ENST00000477893 MAP3K20Q9NYL2 800 aaKnown RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
ERCC8-205ENST00000477893 SPDYE3A6NKU9 549 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 ZBBXA8MT70 800 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 GRXCR1A8MXD5 290 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 NOP56O00567 594 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 KPNA6O60684 536 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 SMARCA1P28370 1054 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 ADCY7P51828 1080 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 CCT2P78371 535 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 MFSD10Q14728 455 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 PTGISQ16647 500 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 HSDL1Q3SXM5 330 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 CELF3Q5SZQ8 465 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 UTP14CQ5TAP6 766 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 ZNF697Q5TEC3 545 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 MYSM1Q5VVJ2 828 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 FAM109BQ6ICB4 259 aaPredicted RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 GDF6Q6KF10 455 aaPredicted RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 TYW1BQ6NUM6 668 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 ZNF365Q70YC5 407 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 C16orf59Q7L2K0 433 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 CYFIP1Q7L576 1253 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 OTOP2Q7RTS6 562 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 C7orf31Q8N865 590 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 PPTC7Q8NI37 304 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 KAT2BQ92831 832 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 PHKBQ93100 1093 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 ZFRQ96KR1 1074 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 UPF3BQ9BZI7 483 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 NCOA5Q9HCD5 579 aaKnown RBP9.51□□□□□ -0.89
ERCC8-205ENST00000477893 IL23AQ9NPF7 189 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 TMEM260Q9NX78 707 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 TELO2Q9Y4R8 837 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 FRMPD4Q14CM0 1322 aa9.51□□□□□ -0.89
ERCC8-205ENST00000477893 KIAA1217Q5T5P2 1943 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 STXBP3O00186 592 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PIK3CDO00329 1044 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 FIBPO43427 364 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 SUPT20HL2P0C7V6 817 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PSMA5P28066 241 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 STK3Q13188 491 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PCNX4Q63HM2 1172 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 NFRKBQ6P4R8 1299 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 PSRC1Q6PGN9 363 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-205ENST00000477893 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 TRIM50Q86XT4 487 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 SAMD3Q8N6K7 520 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 KCNB2Q92953 911 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 EMID1Q96A84 441 aaPredicted RBP9.5□□□□□ -0.89
ERCC8-205ENST00000477893 UIMC1Q96RL1 719 aa9.5□□□□□ -0.89
ERCC8-205ENST00000477893 FAM217BQ9NTX9 383 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms