RNA–Protein interactions for RNA: ENST00000477876.1

NUP58-210, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-210ENST00000477876 PPP1R42Q7Z4L9 355 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 CCDC146Q8IYE0 955 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 LRRN4CLQ8ND94 238 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 PIWIL2Q8TC59 973 aaKnown RBP7.4□□□□□ -1.22
NUP58-210ENST00000477876 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 PRDM7Q9NQW5 492 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 PGAP2Q9UHJ9 254 aa7.4□□□□□ -1.22
NUP58-210ENST00000477876 ABT1Q9ULW3 272 aaKnown RBP7.4□□□□□ -1.22
NUP58-210ENST00000477876 LAMB2P55268 1798 aa7.4□□□□□ -1.23
NUP58-210ENST00000477876 DUOX1Q9NRD9 1551 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 RBAK-RBAKDNI3L0D1 243 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 RAD17O75943 681 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 PAPLNO95428 1278 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 GMPSP49915 693 aaPredicted RBP7.39□□□□□ -1.23
NUP58-210ENST00000477876 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 PARP10Q53GL7 1025 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 LDLRAD1Q5T700 205 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 USP50Q70EL3 339 aaPredicted RBP7.39□□□□□ -1.23
NUP58-210ENST00000477876 SP8Q8IXZ3 490 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 CAPNS2Q96L46 248 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 LRRC3Q9BY71 257 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 GLIS2Q9BZE0 524 aaPredicted RBP7.39□□□□□ -1.23
NUP58-210ENST00000477876 ZSWIM5Q9P217 1185 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 KLHL3Q9UH77 587 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 ZNRF3Q9ULT6 936 aa7.39□□□□□ -1.23
NUP58-210ENST00000477876 ARID1BQ8NFD5 2236 aaPredicted RBP7.38□□□□□ -1.23
NUP58-210ENST00000477876 BBOX1O75936 387 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 KIAA2012Q0VF49 1180 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 GRM1Q13255 1194 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 SAPCD2Q86UD0 394 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 NIM1KQ8IY84 436 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 CELF1Q92879 486 aaKnown RBP7.38□□□□□ -1.23
NUP58-210ENST00000477876 ABHD8Q96I13 439 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 CCDC74BQ96LY2 380 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 Q96M66 194 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 GPR101Q96P66 508 aaPredicted RBP7.38□□□□□ -1.23
NUP58-210ENST00000477876 BACH2Q9BYV9 841 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
NUP58-210ENST00000477876 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
NUP58-210ENST00000477876 RBM47A0AV96 593 aaKnown RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 WTIPA6NIX2 430 aaPredicted RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 CELF2O95319 508 aaKnown RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 TNNI2P48788 182 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 GRAPQ13588 217 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 DPP8Q6V1X1 898 aaPredicted RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 GRAPLQ8TC17 118 aaPredicted RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 FAM89AQ96GI7 184 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 VPS33BQ9H267 617 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 ADARB2Q9NS39 739 aaKnown RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 POLLQ9UGP5 575 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 ADAMTS1Q9UHI8 967 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 TRMT112Q9UI30 125 aaKnown RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 CNOT7Q9UIV1 285 aaKnown RBP7.37□□□□□ -1.23
NUP58-210ENST00000477876 PCDHB14Q9Y5E9 798 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 ANKRD36CQ5JPF3 1778 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 THSD7BQ9C0I4 1608 aa7.37□□□□□ -1.23
NUP58-210ENST00000477876 TRPM7Q96QT4 1865 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 DDX60Q8IY21 1712 aaKnown RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 ASTN2O75129 1339 aaPredicted RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 SH3TC1Q8TE82 1336 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 MAPK8IP3Q9UPT6 1336 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 SLC22A31A6NKX4 558 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 PSMD14O00487 310 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 DNAJA2O60884 412 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 ATE1O95260 518 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 GPSM2P81274 684 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 MAP2K1Q02750 393 aaPredicted RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 CIAPIN1Q6FI81 312 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 TMPRSS7Q7RTY8 843 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 PHACTR4Q8IZ21 702 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 KRTAP4-11Q9BYQ6 195 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 PHAXQ9H814 394 aaKnown RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 BABAM1Q9NWV8 329 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 KCNH3Q9ULD8 1083 aa7.36□□□□□ -1.23
NUP58-210ENST00000477876 LAS1LQ9Y4W2 734 aaKnown RBP7.36□□□□□ -1.23
NUP58-210ENST00000477876 RTL9Q8NET4 1388 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 POLR2AP24928 1970 aaKnown RBP7.35□□□□□ -1.23
NUP58-210ENST00000477876 ZNF853P0CG23 659 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 CRKP46108 304 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 FZD5Q13467 585 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 SF3B3Q15393 1217 aaKnown RBP7.35□□□□□ -1.23
NUP58-210ENST00000477876 DDX46Q7L014 1031 aaKnown RBP7.35□□□□□ -1.23
NUP58-210ENST00000477876 USP48Q86UV5 1035 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 PLBD2Q8NHP8 589 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 RNF141Q8WVD5 230 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 KIF2CQ99661 725 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 GPR62Q9BZJ7 368 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 DUSP15Q9H1R2 295 aaPredicted RBP7.35□□□□□ -1.23
NUP58-210ENST00000477876 TRIT1Q9H3H1 467 aaKnown RBP7.35□□□□□ -1.23
NUP58-210ENST00000477876 DBNDD1Q9H9R9 158 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 CTNND2Q9UQB3 1225 aa7.35□□□□□ -1.23
NUP58-210ENST00000477876 SCN9AQ15858 1988 aa7.34□□□□□ -1.23
NUP58-210ENST00000477876 GBP1P32455 592 aa7.34□□□□□ -1.23
NUP58-210ENST00000477876 MAP2K2P36507 400 aa7.34□□□□□ -1.23
NUP58-210ENST00000477876 ZNF76P36508 570 aa7.34□□□□□ -1.23
NUP58-210ENST00000477876 APOBRQ0VD83 1088 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms