RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 GGA3Q9NZ52 723 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 ADD3Q9UEY8 706 aaKnown RBP8.85□□□□□ -0.99
VMA21-203ENST00000477649 ADAMTS5Q9UNA0 930 aa8.85□□□□□ -0.99
VMA21-203ENST00000477649 ZNF536O15090 1300 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 A0A1W2PQC6 194 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 GOLGA6L9A6NEM1 432 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 MYMKA6NI61 221 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 FAM86B1E9PN63 330 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 VWA5AO00534 786 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 STX10O60499 249 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 GNA14O95837 355 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 FAM86B2P0C5J1 330 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 PLA2G4BP0C869 781 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 GAP43P17677 238 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 YY1P25490 414 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 HOXA13P31271 388 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 MAP3K9P80192 1104 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 EHHADHQ08426 723 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 TBX2Q13207 712 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 MTMR2Q13614 643 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 MCM6Q14566 821 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 COG2Q14746 738 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 EPHA7Q15375 998 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CCDC144BQ3MJ40 725 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CENPPQ6IPU0 288 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 TTI2Q6NXR4 508 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 USP50Q70EL3 339 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 OTOP1Q7RTM1 612 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 PPFIBP1Q86W92 1011 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 TRMT44Q8IYL2 757 aaKnown RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 CSGALNACT2Q8N6G5 542 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 MB21D1Q8N884 522 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 SYT2Q8N9I0 419 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 RDM1Q8NG50 284 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.84□□□□□ -0.99
VMA21-203ENST00000477649 TRPM4Q8TD43 1214 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CLEC4DQ8WXI8 215 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 DDX12PQ92771 950 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 TRIM47Q96LD4 638 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 PANX2Q96RD6 677 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 MED15Q96RN5 788 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 MXRA8Q9BRK3 442 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 NUP58Q9BVL2 599 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 TEKT3Q9BXF9 490 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 GLIS2Q9BZE0 524 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 RPAP3Q9H6T3 665 aaPredicted RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 SAMSN1Q9NSI8 373 aaKnown RBP8.84□□□□□ -0.99
VMA21-203ENST00000477649 TBC1D22BQ9NU19 505 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 NRBP1Q9UHY1 535 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 VAV3Q9UKW4 847 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CSADQ9Y600 493 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
VMA21-203ENST00000477649 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -1
VMA21-203ENST00000477649 DOCK1Q14185 1865 aa8.83□□□□□ -1
VMA21-203ENST00000477649 FRMD3A2A2Y4 597 aa8.83□□□□□ -1
VMA21-203ENST00000477649 KCNJ18B7U540 433 aa8.83□□□□□ -1
VMA21-203ENST00000477649 N4BP3O15049 544 aa8.83□□□□□ -1
VMA21-203ENST00000477649 ARHGAP6O43182 974 aa8.83□□□□□ -1
VMA21-203ENST00000477649 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -1
VMA21-203ENST00000477649 GAS7O60861 476 aa8.83□□□□□ -1
VMA21-203ENST00000477649 PSMD10O75832 226 aa8.83□□□□□ -1
VMA21-203ENST00000477649 EYA4O95677 639 aa8.83□□□□□ -1
VMA21-203ENST00000477649 CASP1P29466 404 aa8.83□□□□□ -1
VMA21-203ENST00000477649 COPB2P35606 906 aa8.83□□□□□ -1
VMA21-203ENST00000477649 PBX1P40424 430 aa8.83□□□□□ -1
VMA21-203ENST00000477649 IREB2P48200 963 aaKnown RBP8.83□□□□□ -1
VMA21-203ENST00000477649 DNM2P50570 870 aa8.83□□□□□ -1
VMA21-203ENST00000477649 SLC12A3P55017 1021 aa8.83□□□□□ -1
VMA21-203ENST00000477649 STX17P56962 302 aa8.83□□□□□ -1
VMA21-203ENST00000477649 SNAP25P60880 206 aa8.83□□□□□ -1
VMA21-203ENST00000477649 CCZ1BP86790 482 aa8.83□□□□□ -1
VMA21-203ENST00000477649 CCZ1P86791 482 aaPredicted RBP8.83□□□□□ -1
VMA21-203ENST00000477649 KCNJ12Q14500 433 aa8.83□□□□□ -1
VMA21-203ENST00000477649 DNTTIP2Q5QJE6 756 aaKnown RBP8.83□□□□□ -1
VMA21-203ENST00000477649 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
VMA21-203ENST00000477649 STXBP4Q6ZWJ1 553 aa8.83□□□□□ -1
VMA21-203ENST00000477649 APTXQ7Z2E3 356 aaKnown RBP8.83□□□□□ -1
VMA21-203ENST00000477649 CATSPER3Q86XQ3 398 aa8.83□□□□□ -1
VMA21-203ENST00000477649 MYOCDQ8IZQ8 938 aa8.83□□□□□ -1
VMA21-203ENST00000477649 DNAJC19Q96DA6 116 aa8.83□□□□□ -1
VMA21-203ENST00000477649 CDHR1Q96JP9 859 aa8.83□□□□□ -1
VMA21-203ENST00000477649 CEP63Q96MT8 703 aa8.83□□□□□ -1
VMA21-203ENST00000477649 ZNF830Q96NB3 372 aaPredicted RBP8.83□□□□□ -1
VMA21-203ENST00000477649 NAP1L5Q96NT1 182 aaPredicted RBP8.83□□□□□ -1
VMA21-203ENST00000477649 NACC1Q96RE7 527 aa8.83□□□□□ -1
VMA21-203ENST00000477649 PLIN2Q99541 437 aa8.83□□□□□ -1
VMA21-203ENST00000477649 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
VMA21-203ENST00000477649 HSD17B14Q9BPX1 270 aa8.83□□□□□ -1
VMA21-203ENST00000477649 ZNF577Q9BSK1 485 aa8.83□□□□□ -1
VMA21-203ENST00000477649 SYT17Q9BSW7 474 aa8.83□□□□□ -1
VMA21-203ENST00000477649 TIPINQ9BVW5 301 aa8.83□□□□□ -1
VMA21-203ENST00000477649 TEX13BQ9BXU2 312 aa8.83□□□□□ -1
VMA21-203ENST00000477649 TMX1Q9H3N1 280 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms