RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 RIOX2Q8IUF8 465 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 WDR11Q9BZH6 1224 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 HOOK1Q9UJC3 728 aaKnown RBP13.61□□□□□ -0.23
PRPF39-203ENST00000477626 ANK1P16157 1881 aa13.61□□□□□ -0.23
PRPF39-203ENST00000477626 KCNA2P16389 499 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 FANCCQ00597 558 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 FSTL1Q12841 308 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 ZSCAN30Q86W11 494 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 TXNRD2Q9NNW7 524 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 TUFT1Q9NNX1 390 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 TELO2Q9Y4R8 837 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 UBA7P41226 1012 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 MAPK7Q13164 816 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 GIT2Q14161 759 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 XRRA1Q6P2D8 792 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 C1orf186Q6ZWK4 172 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 ERO1BQ86YB8 467 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 MCF2L2Q86YR7 1114 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 A1CFQ9NQ94 594 aaKnown RBP13.6□□□□□ -0.23
PRPF39-203ENST00000477626 PICK1Q9NRD5 415 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 CCNE2O96020 404 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 TRMT44Q8IYL2 757 aaKnown RBP13.6□□□□□ -0.23
PRPF39-203ENST00000477626 EIF2AK1Q9BQI3 630 aaKnown RBP13.6□□□□□ -0.23
PRPF39-203ENST00000477626 AGTPBP1Q9UPW5 1226 aa13.6□□□□□ -0.23
PRPF39-203ENST00000477626 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 TESPA1A2RU30 521 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ESPNB1AK53 854 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 PPP1R37O75864 691 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 CLCN1P35523 988 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 MIIPQ5JXC2 388 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 KIAA1524Q8TCG1 905 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 SNX29Q8TEQ0 813 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 DCPSQ96C86 337 aaKnown RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 PEX10O60683 326 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ATG7O95352 703 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 CFBP00751 764 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ICAM3P32942 547 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ANKRD13AQ8IZ07 590 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 CACTINQ8WUQ7 758 aaKnown RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 DDX12PQ92771 950 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 TTYH3Q9C0H2 523 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 IMPACTQ9P2X3 320 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 NFE2L3Q9Y4A8 694 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 POTEFA5A3E0 1075 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 E9PMD0 336 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 ATP9AO75110 1047 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 MARSP56192 900 aaKnown RBP13.59□□□□□ -0.23
PRPF39-203ENST00000477626 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 DAW1Q8N136 415 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 PLIN2Q99541 437 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
PRPF39-203ENST00000477626 HPS3Q969F9 1004 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 NT5C3AQ9H0P0 336 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 PYCARDQ9ULZ3 195 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 NFASCO94856 1347 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 ITIH6Q6UXX5 1313 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 FAM133AQ8N9E0 248 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.24
PRPF39-203ENST00000477626 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
PRPF39-203ENST00000477626 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
PRPF39-203ENST00000477626 TXLNAP40222 546 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 TMEM266Q2M3C6 531 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 LRRC8AQ8IWT6 810 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 FEZ1Q99689 392 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 TEX13BQ9BXU2 312 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 TRIM49BA6NDI0 452 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 PLA2G4BP0C869 781 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 SP2Q02086 613 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 RUSC1Q9BVN2 902 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 RNF146Q9NTX7 359 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 SPATA31C2B4DYI2 1134 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 KCNJ6P48051 423 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 CASP5P51878 434 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 COASYQ13057 564 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 PSMD2Q13200 908 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 CST9Q5W186 159 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 ANKRD40Q6AI12 368 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 BORCS6Q96GS4 357 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 HOXC10Q9NYD6 342 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 IFNKQ9P0W0 207 aa13.57□□□□□ -0.24
PRPF39-203ENST00000477626 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 SOWAHBA6NEL2 793 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 ZBTB39O15060 712 aa13.56□□□□□ -0.24
PRPF39-203ENST00000477626 EYA4O95677 639 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms