RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 PIK3CDO00329 1044 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 MEIS2O14770 477 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 PRC1O43663 620 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 LPXNO60711 386 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 LGR5O75473 907 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SMARCA1P28370 1054 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 THPOP40225 353 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 TFF2Q03403 129 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 AAK1Q2M2I8 961 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 CUL5Q93034 780 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 ATP6V0A1Q93050 837 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 RAD9AQ99638 391 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 GPR20Q99678 358 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
HDLBP-236ENST00000477477 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 BAZ2BQ9UIF8 2168 aaKnown RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 PRRC2BQ5JSZ5 2229 aaKnown RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-236ENST00000477477 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 RSPH10B2B2RC85 870 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 TREHO43280 583 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 RSPH10BP0C881 870 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 BMP1P13497 986 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 MCM5P33992 734 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 GNAQP50148 359 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-236ENST00000477477 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 TMTC2Q8N394 836 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 SRBD1Q8N5C6 995 aaKnown RBP13.1□□□□□ -0.31
HDLBP-236ENST00000477477 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
HDLBP-236ENST00000477477 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 SLC27A2O14975 620 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 CAND2O75155 1236 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 RXRAP19793 462 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 ERVK-21P61565 698 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 COL9A3Q14050 684 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-236ENST00000477477 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
HDLBP-236ENST00000477477 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
HDLBP-236ENST00000477477 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 RNPEPQ9H4A4 650 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-236ENST00000477477 COG5Q9UP83 839 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 TELO2Q9Y4R8 837 aa13.09□□□□□ -0.31
HDLBP-236ENST00000477477 MYH7BA7E2Y1 1941 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 AMHP03971 560 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CALM1P0DP23 149 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CALM2P0DP24 149 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CALM3P0DP25 149 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 GNAT1P11488 350 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 LIFRP42702 1097 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 KCNQ1P51787 676 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 ADAM17P78536 824 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 SP4Q02446 784 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CREB3L3Q68CJ9 461 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 MYOCDQ8IZQ8 938 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CMTR1Q8N1G2 835 aaKnown RBP13.08□□□□□ -0.32
HDLBP-236ENST00000477477 SUGCTQ9HAC7 445 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 SETD4Q9NVD3 440 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.32
HDLBP-236ENST00000477477 COL4A4P53420 1690 aaPredicted RBP13.08□□□□□ -0.32
HDLBP-236ENST00000477477 CTSHP09668 335 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 HTRA4P83105 476 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-236ENST00000477477 NECTIN1Q15223 517 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 UTP14CQ5TAP6 766 aaKnown RBP13.07□□□□□ -0.32
HDLBP-236ENST00000477477 RAB11FIP4Q86YS3 637 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 GIMAP8Q8ND71 665 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-236ENST00000477477 LMBR1Q8WVP7 490 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 SEPT8Q92599 483 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 HLA-CQ95604 372 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 GPRASP2Q96D09 838 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-236ENST00000477477 PSTPIP2Q9H939 334 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 INSL6Q9Y581 213 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 BDP1A6H8Y1 2624 aa13.07□□□□□ -0.32
HDLBP-236ENST00000477477 NCOR1O75376 2440 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 ATP9AO75110 1047 aa13.06□□□□□ -0.32
HDLBP-236ENST00000477477 KCNA2P16389 499 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms