RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 RGS20O76081 388 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 SNAI1O95863 264 aaPredicted RBP20.02■□□□□ 0.8
SREBF1-211ENST00000476994 ACLYP53396 1101 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 ACVR2BQ13705 512 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 PTPAQ15257 358 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 SHHQ15465 462 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 LETM2Q2VYF4 491 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 PPP4R3AQ6IN85 833 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 XRRA1Q6P2D8 792 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 GLT1D1Q96MS3 346 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 TMEM39AQ9NV64 488 aa20.02■□□□□ 0.8
SREBF1-211ENST00000476994 LAMA2P24043 3122 aaKnown RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 SLC37A4O43826 429 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 ADAMTS4O75173 837 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 C6orf222P0C671 652 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 ITGB5P18084 799 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 CCND2P30279 289 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 NASPP49321 788 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 FOXD4L6Q3SYB3 417 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 FOXD4L3Q6VB84 417 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 CLEC17AQ6ZS10 378 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 ARMCX2Q7L311 632 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 C4orf32Q8N8J7 132 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 CYP2W1Q8TAV3 490 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 VTI1AQ96AJ9 217 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 LENG1Q96BZ8 264 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 ZFP91Q96JP5 570 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 INPP4AQ96PE3 977 aaPredicted RBP20.01■□□□□ 0.79
SREBF1-211ENST00000476994 KATNBL1Q9H079 304 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 POLR3EQ9NVU0 708 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 CLIC4Q9Y696 253 aa20.01■□□□□ 0.79
SREBF1-211ENST00000476994 TRIM43BA6NCK2 446 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 MEIS1O00470 390 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 GCFC2P16383 781 aaKnown RBP20■□□□□ 0.79
SREBF1-211ENST00000476994 ATP2B1P20020 1258 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 ORC2Q13416 577 aaPredicted RBP20■□□□□ 0.79
SREBF1-211ENST00000476994 Q4G0T1 1027 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 CEP55Q53EZ4 464 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 ATL3Q6DD88 541 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 SH3RF1Q7Z6J0 888 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 TRIM43Q96BQ3 446 aaPredicted RBP20■□□□□ 0.79
SREBF1-211ENST00000476994 TOX2Q96NM4 488 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 MXRA8Q9BRK3 442 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 TMEM60Q9H2L4 133 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 RTEL1Q9NZ71 1219 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 ATP6V1DQ9Y5K8 247 aa20■□□□□ 0.79
SREBF1-211ENST00000476994 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
SREBF1-211ENST00000476994 ASB14A6NK59 587 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 KIAA0355O15063 1070 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 CCNT1O60563 726 aaKnown RBP19.99■□□□□ 0.79
SREBF1-211ENST00000476994 MYCLP12524 364 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-211ENST00000476994 SEMA3FQ13275 785 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 SF3A1Q15459 793 aaKnown RBP19.99■□□□□ 0.79
SREBF1-211ENST00000476994 ZNF174Q15697 407 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 KCNA10Q16322 511 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 CCDC144BQ3MJ40 725 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 NIPA1Q7RTP0 329 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 ZNF396Q96N95 335 aaPredicted RBP19.99■□□□□ 0.79
SREBF1-211ENST00000476994 KCNMB3Q9NPA1 279 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 TFIP11Q9UBB9 837 aaKnown RBP19.99■□□□□ 0.79
SREBF1-211ENST00000476994 ELP1O95163 1332 aa19.99■□□□□ 0.79
SREBF1-211ENST00000476994 STAM2O75886 525 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 CST5P28325 142 aaPredicted RBP19.98■□□□□ 0.79
SREBF1-211ENST00000476994 MCM7P33993 719 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 FPGSQ05932 587 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 STXBP2Q15833 593 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 GNASQ5JWF2 1037 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 C9orf50Q5SZB4 431 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 ANKRD33Q7Z3H0 272 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 KLHDC9Q8NEP7 349 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 ETNPPLQ8TBG4 499 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 RNPC3Q96LT9 517 aaKnown RBP19.98■□□□□ 0.79
SREBF1-211ENST00000476994 FAM161BQ96MY7 647 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 NAP1L4Q99733 375 aaKnown RBP19.98■□□□□ 0.79
SREBF1-211ENST00000476994 JADE2Q9NQC1 790 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 DDX25Q9UHL0 483 aaKnown RBP19.98■□□□□ 0.79
SREBF1-211ENST00000476994 MRVI1Q9Y6F6 885 aa19.98■□□□□ 0.79
SREBF1-211ENST00000476994 EIF3JO75822 258 aaKnown RBP19.97■□□□□ 0.79
SREBF1-211ENST00000476994 BAG4O95429 457 aaKnown RBP19.97■□□□□ 0.79
SREBF1-211ENST00000476994 SMAD3P84022 425 aaKnown RBP19.97■□□□□ 0.79
SREBF1-211ENST00000476994 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
SREBF1-211ENST00000476994 PDE4DQ08499 809 aa19.97■□□□□ 0.79
SREBF1-211ENST00000476994 LINC00301Q8NCQ3 95 aa19.97■□□□□ 0.79
SREBF1-211ENST00000476994 HAS1Q92839 578 aa19.97■□□□□ 0.79
SREBF1-211ENST00000476994 GPRASP2Q96D09 838 aa19.97■□□□□ 0.79
SREBF1-211ENST00000476994 MTMR9Q96QG7 549 aa19.97■□□□□ 0.79
SREBF1-211ENST00000476994 A0A0U1RQG5 324 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-211ENST00000476994 B4DLN1 442 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 TLR3O15455 904 aaKnown RBP19.96■□□□□ 0.79
SREBF1-211ENST00000476994 NEMFO60524 1076 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 YEATS4O95619 227 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 ASGR1P07306 291 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 ARP10275 920 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 ICAM3P32942 547 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 GJA9P57773 515 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 KRT85P78386 507 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 SLC39A14Q15043 492 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 PRR16Q569H4 304 aa19.96■□□□□ 0.79
SREBF1-211ENST00000476994 PLA2G4DQ86XP0 818 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms