RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 RMDN1Q96DB5 314 aa8.67□□□□□ -1.02
PRPF3-205ENST00000476970 MFSD1Q9H3U5 465 aa8.67□□□□□ -1.02
PRPF3-205ENST00000476970 BARX2Q9UMQ3 279 aaPredicted RBP8.67□□□□□ -1.02
PRPF3-205ENST00000476970 STX8Q9UNK0 236 aa8.67□□□□□ -1.02
PRPF3-205ENST00000476970 PKD1L2Q7Z442 2459 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 OTOGLQ3ZCN5 2332 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.66□□□□□ -1.02
PRPF3-205ENST00000476970 HAS3O00219 553 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 ZNF286BP0CG31 522 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 GNAT2P19087 354 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 NRIP1P48552 1158 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
PRPF3-205ENST00000476970 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
PRPF3-205ENST00000476970 CCDC62Q6P9F0 684 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 TMEM105Q8N8V8 129 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 PPTC7Q8NI37 304 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 KIF1BPQ96EK5 621 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 CNTNAP3BQ96NU0 1288 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 STRBPQ96SI9 672 aaKnown RBP8.66□□□□□ -1.02
PRPF3-205ENST00000476970 CNTNAP3Q9BZ76 1288 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 MAF1Q9H063 256 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 PUS7LQ9H0K6 701 aaKnown RBP8.66□□□□□ -1.02
PRPF3-205ENST00000476970 SEMA4AQ9H3S1 761 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 SORCS3Q9UPU3 1222 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 NR2E1Q9Y466 385 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 FAM208BQ5VWN6 2430 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 PLXNA4Q9HCM2 1894 aa8.66□□□□□ -1.02
PRPF3-205ENST00000476970 WDR19Q8NEZ3 1342 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 C17orf102A2RUQ5 167 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 POTEMA6NI47 508 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 GSG1L2A8MUP6 293 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 LINC00271P0C7V0 271 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 ATP5JP18859 108 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 TFAP4Q01664 338 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 LY6KQ17RY6 165 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 SYDE2Q5VT97 1194 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 FTSJ3Q8IY81 847 aaKnown RBP8.65□□□□□ -1.02
PRPF3-205ENST00000476970 MIER1Q8N108 512 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 KREMEN2Q8NCW0 462 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 KCNG4Q8TDN1 519 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 SUSD6Q92537 303 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 CHMP4CQ96CF2 233 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 NEK1Q96PY6 1258 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 CDCA3Q99618 268 aaPredicted RBP8.65□□□□□ -1.02
PRPF3-205ENST00000476970 HAUS7Q99871 368 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 NACAP1Q9BZK3 213 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 BOLA2Q9H3K6 86 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 RC3H2Q9HBD1 1191 aaKnown RBP8.65□□□□□ -1.02
PRPF3-205ENST00000476970 PLAGL2Q9UPG8 496 aa8.65□□□□□ -1.02
PRPF3-205ENST00000476970 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
PRPF3-205ENST00000476970 GLP2RO95838 553 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 LMNAP02545 664 aaKnown RBP8.64□□□□□ -1.03
PRPF3-205ENST00000476970 APPP05067 770 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 CTSHP09668 335 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 CLCN5P51795 746 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
PRPF3-205ENST00000476970 STXBP2Q15833 593 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 BTNL9Q6UXG8 535 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 ADGRD2Q7Z7M1 963 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 PLCD3Q8N3E9 789 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
PRPF3-205ENST00000476970 CLEC4DQ8WXI8 215 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 IWS1Q96ST2 819 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 TLE6Q9H808 572 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
PRPF3-205ENST00000476970 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 CCDC171Q6TFL3 1326 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 TSPY2A6NKD2 308 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 ITGB1P05556 798 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 GNAT1P11488 350 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
PRPF3-205ENST00000476970 CAMK1Q14012 370 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 RBM23Q86U06 439 aaKnown RBP8.63□□□□□ -1.03
PRPF3-205ENST00000476970 KIAA2013Q8IYS2 634 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 CMTR2Q8IYT2 770 aaKnown RBP8.63□□□□□ -1.03
PRPF3-205ENST00000476970 POF1BQ8WVV4 589 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 APPBP2Q92624 585 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 EPB41L4AQ9HCS5 686 aaPredicted RBP8.63□□□□□ -1.03
PRPF3-205ENST00000476970 DDX41Q9UJV9 622 aaKnown RBP8.63□□□□□ -1.03
PRPF3-205ENST00000476970 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 PCDHGC5Q9Y5F6 944 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 CFAP47Q6ZTR5 3102 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 USP24Q9UPU5 2620 aa8.63□□□□□ -1.03
PRPF3-205ENST00000476970 FRYLO94915 3013 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 GPAA1O43292 621 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 CHGBP05060 677 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 HOXC8P31273 242 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 SLC16A2P36021 539 aa8.62□□□□□ -1.03
PRPF3-205ENST00000476970 UBE3AQ05086 875 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms