RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 FAM126BQ8IXS8 530 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 SLC43A3Q8NBI5 491 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 DAGLBQ8NCG7 672 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 PPP1R13LQ8WUF5 828 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 LBHD1Q9BQE6 289 aaPredicted RBP17.13■□□□□ 0.33
DFFA-203ENST00000476658 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
DFFA-203ENST00000476658 PPFIA4O75335 1185 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 CYP3A4P08684 503 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 ARP10275 920 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 MAGEA10P43363 369 aaPredicted RBP17.12■□□□□ 0.33
DFFA-203ENST00000476658 MDM2Q00987 491 aaPredicted RBP17.12■□□□□ 0.33
DFFA-203ENST00000476658 PLA2G4DQ86XP0 818 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 CRYGNQ8WXF5 182 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 PHF20Q9BVI0 1012 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
DFFA-203ENST00000476658 TRIM43BA6NCK2 446 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 FAM86B1E9PN63 330 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 MEIS1O00470 390 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 FAM86B2P0C5J1 330 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 HOXD8P13378 290 aaPredicted RBP17.11■□□□□ 0.33
DFFA-203ENST00000476658 PSEN2P49810 448 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 NPY5RQ15761 445 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 NFRKBQ6P4R8 1299 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 NIPA1Q7RTP0 329 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 TBCKQ8TEA7 893 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 KAT2BQ92831 832 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 TRIM43Q96BQ3 446 aaPredicted RBP17.11■□□□□ 0.33
DFFA-203ENST00000476658 GPR20Q99678 358 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 LLPHQ9BRT6 129 aaKnown RBP17.11■□□□□ 0.33
DFFA-203ENST00000476658 TRPV6Q9H1D0 765 aa17.11■□□□□ 0.33
DFFA-203ENST00000476658 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
DFFA-203ENST00000476658 TRIP12Q14669 1992 aaPredicted RBP17.11■□□□□ 0.33
DFFA-203ENST00000476658 M0R2N6 131 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 KIAA0355O15063 1070 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 B4GALT4O60513 344 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 F2P00734 622 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 LGALS2P05162 132 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 RAG1P15918 1043 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 TRIM29Q14134 588 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 MFSD10Q14728 455 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
DFFA-203ENST00000476658 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 COLQQ9Y215 455 aaPredicted RBP17.1■□□□□ 0.33
DFFA-203ENST00000476658 TELO2Q9Y4R8 837 aa17.1■□□□□ 0.33
DFFA-203ENST00000476658 TRIOBPQ9H2D6 2365 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 IGLV3-22A0A075B6J6 115 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 CCDC194A0A1B0GVG4 234 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 CD4P01730 458 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 KRT2P35908 639 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 USP11P51784 963 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 SETQ01105 290 aaPredicted RBP17.09■□□□□ 0.33
DFFA-203ENST00000476658 PTPN11Q06124 597 aaPredicted RBP17.09■□□□□ 0.33
DFFA-203ENST00000476658 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
DFFA-203ENST00000476658 KIAA0753Q2KHM9 967 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 PRR16Q569H4 304 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 C7orf31Q8N865 590 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 BADQ92934 168 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 GDF15Q99988 308 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 JPH1Q9HDC5 661 aaPredicted RBP17.09■□□□□ 0.33
DFFA-203ENST00000476658 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
DFFA-203ENST00000476658 SLC9A2Q9UBY0 812 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 TBX21Q9UL17 535 aa17.09■□□□□ 0.33
DFFA-203ENST00000476658 NFASCO94856 1347 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 H3BRB1 525 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 CD2BP2O95400 341 aaKnown RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 CIITAP33076 1130 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 TCF7P36402 384 aaPredicted RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 MCM2P49736 904 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 ITGB3BPQ13352 177 aaPredicted RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 INF2Q27J81 1249 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 ZNF577Q9BSK1 485 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 C16orf70Q9BSU1 422 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 PPP1R12CQ9BZL4 782 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 TUT1Q9H6E5 874 aaKnown RBP17.08■□□□□ 0.32
DFFA-203ENST00000476658 NOD1Q9Y239 953 aa17.08■□□□□ 0.32
DFFA-203ENST00000476658 HAS3O00219 553 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 IPO5O00410 1097 aaKnown RBP17.07■□□□□ 0.32
DFFA-203ENST00000476658 SUPT20HL2P0C7V6 817 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 ITGB8P26012 769 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 KRT40Q6A162 431 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 PIK3AP1Q6ZUJ8 805 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 TRIM50Q86XT4 487 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 TMX3Q96JJ7 454 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
DFFA-203ENST00000476658 ZNF215Q9UL58 517 aaPredicted RBP17.07■□□□□ 0.32
DFFA-203ENST00000476658 MYH9P35579 1960 aaKnown RBP17.07■□□□□ 0.32
DFFA-203ENST00000476658 WDR81Q562E7 1941 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms