RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RNPEPQ9H4A4 650 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 SETD4Q9NVD3 440 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 INSL6Q9Y581 213 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 TAF6LQ9Y6J9 622 aa13.93□□□□□ -0.18
HDAC6-219ENST00000476625 C17orf102A2RUQ5 167 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 PCP11498 1178 aaKnown RBP13.92□□□□□ -0.18
HDAC6-219ENST00000476625 HOXC8P31273 242 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
HDAC6-219ENST00000476625 SP4Q02446 784 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 SEC23AQ15436 765 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 STOX1Q6ZVD7 989 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 TMEM192Q8IY95 271 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 BANK1Q8NDB2 785 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 MTMR8Q96EF0 704 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 YME1L1Q96TA2 773 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
HDAC6-219ENST00000476625 H3BRB1 525 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 LINC01565O15544 149 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 CYTH3O43739 400 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 PARNO95453 639 aaKnown RBP13.91□□□□□ -0.18
HDAC6-219ENST00000476625 IGHDP01880 384 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 LINC00271P0C7V0 271 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 LTBRP36941 435 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 GHRHRQ02643 423 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-219ENST00000476625 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
HDAC6-219ENST00000476625 RUFY4Q6ZNE9 571 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 TOP1MTQ969P6 601 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 TUT1Q9H6E5 874 aaKnown RBP13.91□□□□□ -0.18
HDAC6-219ENST00000476625 MLXIPQ9HAP2 919 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
HDAC6-219ENST00000476625 PALM3A6NDB9 673 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-219ENST00000476625 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 H3BNC9 293 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 ZBTB5O15062 677 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 GRM6O15303 877 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 EFCAB14O75071 495 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 PPFIA4O75335 1185 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 CCND2P30279 289 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 ZP2Q05996 745 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
HDAC6-219ENST00000476625 CYFIP1Q7L576 1253 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 RPAINQ86UA6 219 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 SEPT8Q92599 483 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 PHOX2BQ99453 314 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
HDAC6-219ENST00000476625 C5orf42Q9H799 3197 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
HDAC6-219ENST00000476625 EMSYQ7Z589 1322 aa13.9□□□□□ -0.19
HDAC6-219ENST00000476625 GHRP10912 638 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 CTNNB1P35222 781 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 IMMTQ16891 758 aaKnown RBP13.89□□□□□ -0.19
HDAC6-219ENST00000476625 LMBR1Q8WVP7 490 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 GPR20Q99678 358 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 UBAC1Q9BSL1 405 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
HDAC6-219ENST00000476625 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
HDAC6-219ENST00000476625 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 TBX10O75333 385 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 CHRNA1P02708 482 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 IRS1P35568 1242 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 HYAL1Q12794 435 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 GRM4Q14833 912 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 TIGD5Q53EQ6 642 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
HDAC6-219ENST00000476625 FBXL18Q96ME1 805 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 DSCC1Q9BVC3 393 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 NSUN3Q9H649 340 aaKnown RBP13.88□□□□□ -0.19
HDAC6-219ENST00000476625 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 MUTYHQ9UIF7 546 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 KMT2EQ8IZD2 1858 aa13.88□□□□□ -0.19
HDAC6-219ENST00000476625 MYO7AQ13402 2215 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 GCOM1H8Y6P7 765 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-219ENST00000476625 NOP56O00567 594 aaKnown RBP13.87□□□□□ -0.19
HDAC6-219ENST00000476625 DCXO43602 365 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 MARK3P27448 753 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 MRE11P49959 708 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
HDAC6-219ENST00000476625 ADAM17P78536 824 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 COL9A3Q14050 684 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-219ENST00000476625 PTPROQ16827 1216 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 HFE2Q6ZVN8 426 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 LINC01599Q8WXQ3 324 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 RC3H2Q9HBD1 1191 aaKnown RBP13.87□□□□□ -0.19
HDAC6-219ENST00000476625 PCDHGC5Q9Y5F6 944 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 FRMPD4Q14CM0 1322 aa13.87□□□□□ -0.19
HDAC6-219ENST00000476625 C19orf67A6NJJ6 358 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 SPATA31C2B4DYI2 1134 aa13.86□□□□□ -0.19
HDAC6-219ENST00000476625 DNAJB1P25685 340 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms