RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ZNF274Q96GC6 653 aaPredicted RBP11.68□□□□□ -0.54
CCM2-208ENST00000476594 ALG1Q9BT22 464 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 GTF2IRD1Q9UHL9 959 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
CCM2-208ENST00000476594 H3BRB1 525 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 CYP2C9P11712 490 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 IFNAR1P17181 557 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 ZNF76P36508 570 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 EVCP57679 992 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 FUT2Q10981 343 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 FAM177A1Q8N128 213 aaPredicted RBP11.67□□□□□ -0.54
CCM2-208ENST00000476594 REXO1Q8N1G1 1221 aaKnown RBP11.67□□□□□ -0.54
CCM2-208ENST00000476594 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCM2-208ENST00000476594 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 ANO3Q9BYT9 981 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
CCM2-208ENST00000476594 TUT1Q9H6E5 874 aaKnown RBP11.67□□□□□ -0.54
CCM2-208ENST00000476594 C17orf102A2RUQ5 167 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 HAS3O00219 553 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 SORBS3O60504 671 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 LGALS2P05162 132 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 XBP1P17861 261 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
CCM2-208ENST00000476594 SP2Q02086 613 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
CCM2-208ENST00000476594 PTK7Q13308 1070 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 RAB30Q15771 203 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 TMEM240Q5SV17 173 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 ZNF365Q70YC5 407 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 SEPT1Q8WYJ6 367 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 KAT2BQ92831 832 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 MXRA8Q9BRK3 442 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 SLC26A6Q9BXS9 759 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 JADE2Q9NQC1 790 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 SH3GLB2Q9NR46 395 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 FAM217BQ9NTX9 383 aaPredicted RBP11.66□□□□□ -0.54
CCM2-208ENST00000476594 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 UBIAD1Q9Y5Z9 338 aa11.66□□□□□ -0.54
CCM2-208ENST00000476594 MYH7BA7E2Y1 1941 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 ZBBXA8MT70 800 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 DEXIO95424 95 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 RPLP2P05387 115 aaKnown RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 SELPP16109 830 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 SREBF1P36956 1147 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 SETQ01105 290 aaPredicted RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 SP4Q02446 784 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 CEP55Q53EZ4 464 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 GDF6Q6KF10 455 aaPredicted RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 GPR20Q99678 358 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 UPF3BQ9BZI7 483 aaKnown RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCM2-208ENST00000476594 WNT8AQ9H1J5 351 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 AZI2Q9H6S1 392 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 JPH1Q9HDC5 661 aaPredicted RBP11.65□□□□□ -0.54
CCM2-208ENST00000476594 MSRAQ9UJ68 235 aa11.65□□□□□ -0.54
CCM2-208ENST00000476594 NFASCO94856 1347 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 UMODL1Q5DID0 1318 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 EFCAB14O75071 495 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 CAND2O75155 1236 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 BAIAP3O94812 1187 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 ACRP10323 421 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 ITGB5P18084 799 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
CCM2-208ENST00000476594 EPHB4P54760 987 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 NLRP5P59047 1200 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 ARHGAP4P98171 946 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 RBL2Q08999 1139 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 SEMA3FQ13275 785 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 TOB2Q14106 344 aaPredicted RBP11.64□□□□□ -0.55
CCM2-208ENST00000476594 UTP14CQ5TAP6 766 aaKnown RBP11.64□□□□□ -0.55
CCM2-208ENST00000476594 GALNT17Q6IS24 598 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 LRRC8DQ7L1W4 858 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 GLG1Q92896 1179 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 PHKBQ93100 1093 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 SCLYQ96I15 445 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 C16orf70Q9BSU1 422 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
CCM2-208ENST00000476594 SMARCAD1Q9H4L7 1026 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 KCNH7Q9NS40 1196 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 ERAP1Q9NZ08 941 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 SLC4A7Q9Y6M7 1214 aa11.64□□□□□ -0.55
CCM2-208ENST00000476594 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 NRCAMQ92823 1304 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 IQCF3P0C7M6 154 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 KCNA2P16389 499 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 DNAJB2P25686 324 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 KCNJ6P48051 423 aa11.63□□□□□ -0.55
CCM2-208ENST00000476594 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
CCM2-208ENST00000476594 NTRK3Q16288 839 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms