RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ANKRD20A3Q5VUR7 823 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ALS2CLQ60I27 953 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 INTS3Q68E01 1043 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 ANO7Q6IWH7 933 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 NLRP9Q7RTR0 991 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PPFIBP1Q86W92 1011 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 GRAMD2AQ8IUY3 354 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SCAIQ8N9R8 606 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 LINS1Q8NG48 757 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SH3TC2Q8TF17 1288 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 COG1Q8WTW3 980 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 IRGQQ8WZA9 623 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CASP10Q92851 521 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 RNF34Q969K3 372 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 DHX58Q96C10 678 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 IFT43Q96FT9 208 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CATSPER2Q96P56 530 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SPSB2Q99619 263 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 HNRNPABQ99729 332 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 APBA2Q99767 749 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CARD9Q9H257 536 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PARVBQ9HBI1 364 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PTPRHQ9HD43 1115 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ABCF3Q9NUQ8 709 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 TBCCD1Q9NVR7 557 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 DDX19BQ9UMR2 479 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 RNF114Q9Y508 228 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 NPATQ14207 1427 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 FGD6Q6ZV73 1430 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CDC42BPAQ5VT25 1732 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 RALGAPBQ86X10 1494 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 FHOD3Q2V2M9 1422 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 VWA3AA6NCI4 1184 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PRSS47A8MTI9 375 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 DNM1LO00429 736 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PER1O15534 1290 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 HNRNPRO43390 633 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 HYAL3O43820 417 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 DIAPH1O60610 1272 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 BAG3O95817 575 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 FAM107AO95990 144 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 LDHBP07195 334 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 GSTT1P30711 240 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SLC16A2P36021 539 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 TUFMP49411 452 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 CYP4A11Q02928 519 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 ARID5AQ03989 594 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 POU5F1BQ06416 359 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 IFI16Q16666 785 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 SHROOM1Q2M3G4 852 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 ZNF362Q5T0B9 420 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 HIBCHQ6NVY1 386 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 ARMCX5Q6P1M9 558 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 C3orf62Q6ZUJ4 267 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 TMC4Q7Z404 712 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 JAMLQ86YT9 394 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 DZIP1LQ8IYY4 767 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 DEPDC4Q8N2C3 294 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 EHBP1Q8NDI1 1231 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 STKLD1Q8NE28 680 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 EPS8L1Q8TE68 723 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 AGAP11Q8TF27 550 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 AZIN2Q96A70 460 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SKA1Q96BD8 255 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 MAELQ96JY0 434 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 MAP3K14Q99558 947 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 NAA15Q9BXJ9 866 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 RTFDC1Q9BY42 306 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 MIS12Q9H081 205 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 DNAJC25Q9H1X3 360 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CLSTN2Q9H4D0 955 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PFDN4Q9NQP4 134 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 FKBP14Q9NWM8 211 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 DCAF16Q9NXF7 216 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CTNNAL1Q9UBT7 734 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 STK39Q9UEW8 545 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CDC23Q9UJX2 597 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 TTC7AQ9ULT0 858 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 SATB2Q9UPW6 733 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CHMP2BQ9UQN3 213 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PCDHB2Q9Y5E7 798 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 FADS3Q9Y5Q0 445 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 WASF2Q9Y6W5 498 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PRXQ9BXM0 1461 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 LMTK2Q8IWU2 1503 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PTPRKQ15262 1439 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 VPS37CA5D8V6 355 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 FOXD2O60548 495 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 F13A1P00488 732 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 GSTT2P0CG29 244 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 GSTT2BP0CG30 244 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 EPB41P11171 864 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 UBL4AP11441 157 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 LSP1P33241 339 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 HALP42357 657 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CDKN1CP49918 316 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 PEX5P50542 639 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 RACK1P63244 317 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 PTGISQ16647 500 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms