RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 POTEEQ6S8J3 1075 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 MYCT1Q8N699 235 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CEP95Q96GE4 821 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 PRMT6Q96LA8 375 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 BSDC1Q9NW68 430 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CAPN6Q9Y6Q1 641 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 BTAF1O14981 1849 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 MROH5Q6ZUA9 1318 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 SPDYE3A6NKU9 549 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 GTPBP6O43824 516 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 MYBL2P10244 700 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 KRT5P13647 590 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 INPP5BP32019 993 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 ACTN2P35609 894 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 KIF11P52732 1056 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CTTNQ14247 550 aaKnown RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 LRRC14Q15048 493 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 IQCEQ6IPM2 695 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CNKSR2Q8WXI2 1034 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 BICD1Q96G01 975 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 MAP3K14Q99558 947 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 JPH2Q9BR39 696 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 PACSIN1Q9BY11 444 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 RAB34Q9BZG1 259 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 FOXP1Q9H334 677 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-204ENST00000476379 USP40Q9NVE5 1235 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 TSKSQ9UJT2 592 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 PCDHA12Q9UN75 941 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 USP20Q9Y2K6 914 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 XDHP47989 1333 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 WDR87Q6ZQQ6 2873 aa5.49□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC169A6NNP5 214 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 KCNA3P22001 575 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TMOD1P28289 359 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ERCC5P28715 1186 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CTNNA1P35221 906 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PEX19P40855 299 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ADAM9Q13443 819 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NTRK3Q16288 839 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 GRIPAP1Q4V328 841 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 MB21D1Q8N884 522 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 GIMAP7Q8NHV1 300 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF384Q8TF68 577 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TMEM47Q9BQJ4 181 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 DISC1Q9NRI5 854 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PHLPP2Q6ZVD8 1323 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ZNF541Q9H0D2 1346 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ITGB4P16144 1822 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PALMO75781 387 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ERLIN2O94905 339 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 FAM13AO94988 1023 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NR2F2P24468 414 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CDC25CP30307 473 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 GMPSP49915 693 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 HDLBPQ00341 1268 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CKAP4Q07065 602 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TMTC3Q6ZXV5 915 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NEK8Q86SG6 692 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 RETREG2Q8NC44 543 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 FERMT2Q96AC1 680 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CAPS2Q9BXY5 557 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CELF4Q9BZC1 486 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 MAGED2Q9UNF1 606 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CEP83Q9Y592 693 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 EIF3CLB5ME19 914 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ADM5C9JUS6 153 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CIAO1O76071 339 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CLTAP09496 248 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TRIM49P0CI25 452 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TRIM49CP0CI26 452 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 DLATP10515 647 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PLTPP55058 493 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 FAM133BQ5BKY9 247 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 KAZNQ674X7 775 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PEX26Q7Z412 305 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 MICALL2Q8IY33 904 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 OGFOD1Q8N543 542 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 TRPM4Q8TD43 1214 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 DDX12PQ92771 950 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 P2RX5Q93086 422 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 HAUS1Q96CS2 278 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NOX5Q96PH1 765 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 EIF3CQ99613 913 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NUDT12Q9BQG2 462 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 RNF26Q9BY78 433 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 LUC7LQ9NQ29 371 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PANK4Q9NVE7 773 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CTTNBP2NLQ9P2B4 639 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ADD3Q9UEY8 706 aaKnown RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CCDC151A5D8V7 595 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 RCCD1A6NED2 376 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 USP17L10C9JJH3 530 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 F5H423 210 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 EPHB6O15197 1021 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 ATMINO43313 823 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-204ENST00000476379 CALCAP01258 141 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 GNA11P29992 359 aa5.48□□□□□ -1.53
CCDC39-204ENST00000476379 NUMBP49757 651 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms