RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 TGFB3P10600 412 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 COL6A1P12109 1028 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 RGS19P49795 217 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CPT1AP50416 773 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ACLYP53396 1101 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 SP4Q02446 784 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CCSAPQ6IQ19 270 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 PCSK9Q8NBP7 692 aaKnown RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CDHR1Q96JP9 859 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 UIMC1Q96RL1 719 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 MLXIPQ9HAP2 919 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 KCNH7Q9NS40 1196 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 PHF24Q9UPV7 400 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 TNRC18O15417 2968 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ATP9AO75110 1047 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 MYL3P08590 195 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 ATN1P54259 1190 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 PRR16Q569H4 304 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CELF3Q5SZQ8 465 aaKnown RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 FOXD4L5Q5VV16 416 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 CYFIP1Q7L576 1253 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 PLA2G4DQ86XP0 818 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 FOXD4L4Q8WXT5 416 aaPredicted RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 SPATA33Q96N06 139 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 TSEN34Q9BSV6 310 aaKnown RBP16.34■□□□□ 0.21
CCNL1-217ENST00000476367 TELO2Q9Y4R8 837 aa16.34■□□□□ 0.21
CCNL1-217ENST00000476367 MOXD2PA6NHM9 499 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 ZEB2O60315 1214 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 MMP3P08254 477 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 KCNA2P16389 499 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 NKX3-2P78367 333 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 LAMC2Q13753 1193 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 NEDD9Q14511 834 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 LETM2Q2VYF4 491 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
CCNL1-217ENST00000476367 MYSM1Q5VVJ2 828 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 PPP4R3AQ6IN85 833 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 GJA10Q969M2 543 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
CCNL1-217ENST00000476367 PCDHB6Q9Y5E3 794 aa16.33■□□□□ 0.2
CCNL1-217ENST00000476367 F13A1P00488 732 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 SETQ01105 290 aaPredicted RBP16.32■□□□□ 0.2
CCNL1-217ENST00000476367 MLLT1Q03111 559 aaPredicted RBP16.32■□□□□ 0.2
CCNL1-217ENST00000476367 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
CCNL1-217ENST00000476367 HSDL1Q3SXM5 330 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 MOXD1Q6UVY6 613 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 EMID1Q96A84 441 aaPredicted RBP16.32■□□□□ 0.2
CCNL1-217ENST00000476367 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 GLT1D1Q96MS3 346 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 TMEM60Q9H2L4 133 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 STARD7Q9NQZ5 370 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
CCNL1-217ENST00000476367 A6NJR5 290 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 NOP56O00567 594 aaKnown RBP16.31■□□□□ 0.2
CCNL1-217ENST00000476367 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
CCNL1-217ENST00000476367 ITGB3BPQ13352 177 aaPredicted RBP16.31■□□□□ 0.2
CCNL1-217ENST00000476367 Q4G0T1 1027 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 METTL7BQ6UX53 244 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 BRAPQ7Z569 592 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 PPTC7Q8NI37 304 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 HAS1Q92839 578 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 SENP7Q9BQF6 1050 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 HTATIP2Q9BUP3 242 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
CCNL1-217ENST00000476367 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
CCNL1-217ENST00000476367 DDX39AO00148 427 aaKnown RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 MSH4O15457 936 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 MAFGO15525 162 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 CHMP4BP1P59074 171 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 GIMAP8Q8ND71 665 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 PDE4DIPQ5VU43 2346 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 TRAPPC10P48553 1259 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 PSMC6P62333 389 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 ZNF174Q15697 407 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 DGKDQ16760 1214 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 MTMR9Q96QG7 549 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
CCNL1-217ENST00000476367 ZSCAN16Q9H4T2 348 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 JPH1Q9HDC5 661 aaPredicted RBP16.3■□□□□ 0.2
CCNL1-217ENST00000476367 IPO5O00410 1097 aaKnown RBP16.29■□□□□ 0.2
CCNL1-217ENST00000476367 PDIA4P13667 645 aaKnown RBP16.29■□□□□ 0.2
CCNL1-217ENST00000476367 MCM7P33993 719 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 SLC39A5Q6ZMH5 540 aa16.29■□□□□ 0.2
CCNL1-217ENST00000476367 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms