RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
MRPL55-228ENST00000476267 ERICH2A1L162 156 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 SMIM10L2AP0DMW4 78 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 SMIM10L2BP0DMW5 78 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 ADAM17P78536 824 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-228ENST00000476267 COL9A3Q14050 684 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-228ENST00000476267 AAK1Q2M2I8 961 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 PLEKHG4Q58EX7 1191 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 METTL7BQ6UX53 244 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 RALYLQ86SE5 291 aaKnown RBP15.17■□□□□ 0.02
MRPL55-228ENST00000476267 GDPD5Q8WTR4 605 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 GPR20Q99678 358 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 MLXIPQ9HAP2 919 aa15.17■□□□□ 0.02
MRPL55-228ENST00000476267 C17orf102A2RUQ5 167 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 PIK3CDO00329 1044 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 MEIS2O14770 477 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 COL9A1P20849 921 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 SART3Q15020 963 aaKnown RBP15.16■□□□□ 0.02
MRPL55-228ENST00000476267 SKIV2LQ15477 1246 aaKnown RBP15.16■□□□□ 0.02
MRPL55-228ENST00000476267 GNPTABQ3T906 1256 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 DBF4BQ8NFT6 615 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
MRPL55-228ENST00000476267 MTA3Q9BTC8 594 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 ZBED2Q9BTP6 218 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 RNPEPQ9H4A4 650 aa15.16■□□□□ 0.02
MRPL55-228ENST00000476267 BDP1A6H8Y1 2624 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 RALGAPA2Q2PPJ7 1873 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 NLRC5Q86WI3 1866 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 TREHO43280 583 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 FIBPO43427 364 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 CAND2O75155 1236 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 DDAH1O94760 285 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 THPOP40225 353 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 NEDD9Q14511 834 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 PCNX4Q63HM2 1172 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 CYFIP1Q7L576 1253 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 CATIPQ7Z7H3 387 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 ATP6V0A1Q93050 837 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 TGS1Q96RS0 853 aaKnown RBP15.15■□□□□ 0.02
MRPL55-228ENST00000476267 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 SUPT16HQ9Y5B9 1047 aaKnown RBP15.15■□□□□ 0.02
MRPL55-228ENST00000476267 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
MRPL55-228ENST00000476267 ATG2AQ2TAZ0 1938 aa15.15■□□□□ 0.02
MRPL55-228ENST00000476267 USP17L6PQ6QN14 398 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 TRIM50Q86XT4 487 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 HLA-CQ95604 372 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 SENP7Q9BQF6 1050 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 RTEL1Q9NZ71 1219 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 INSL6Q9Y581 213 aa15.14■□□□□ 0.01
MRPL55-228ENST00000476267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.13■□□□□ 0.01
MRPL55-228ENST00000476267 PLEKHA8P1O95397 391 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 FAM26DQ5JW98 314 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 XRRA1Q6P2D8 792 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
MRPL55-228ENST00000476267 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 C17orf80Q9BSJ5 609 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
MRPL55-228ENST00000476267 SETD4Q9NVD3 440 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 RAPGEFL1Q9UHV5 662 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 MTUS1Q9ULD2 1270 aa15.13■□□□□ 0.01
MRPL55-228ENST00000476267 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.12■□□□□ 0.01
MRPL55-228ENST00000476267 NOP56O00567 594 aaKnown RBP15.12■□□□□ 0.01
MRPL55-228ENST00000476267 SH2B2O14492 632 aaPredicted RBP15.12■□□□□ 0.01
MRPL55-228ENST00000476267 AMHP03971 560 aa15.12■□□□□ 0.01
MRPL55-228ENST00000476267 FAM117BQ6P1L5 589 aa15.12■□□□□ 0.01
MRPL55-228ENST00000476267 CTCFLQ8NI51 663 aaPredicted RBP15.12■□□□□ 0.01
MRPL55-228ENST00000476267 LMBR1Q8WVP7 490 aa15.12■□□□□ 0.01
MRPL55-228ENST00000476267 TOP1MTQ969P6 601 aa15.12■□□□□ 0.01
MRPL55-228ENST00000476267 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
MRPL55-228ENST00000476267 PRC1O43663 620 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 ATP9AO75110 1047 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 CTSHP09668 335 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 KCNA2P16389 499 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 ITGB5P18084 799 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 KIF5BP33176 963 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 RPAINQ86UA6 219 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 MYOCDQ8IZQ8 938 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 SMARCC2Q8TAQ2 1214 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 GPRASP2Q96D09 838 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
MRPL55-228ENST00000476267 LIFRP42702 1097 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 NECTIN1Q15223 517 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 CMTR1Q8N1G2 835 aaKnown RBP15.1■□□□□ 0.01
MRPL55-228ENST00000476267 FBXO22Q8NEZ5 403 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 SEPT8Q92599 483 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 KHSRPQ92945 711 aaKnown RBP eCLIP15.1■□□□□ 0.01
MRPL55-228ENST00000476267 TMEM87BQ96K49 555 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
MRPL55-228ENST00000476267 RC3H2Q9HBD1 1191 aaKnown RBP15.1■□□□□ 0.01
MRPL55-228ENST00000476267 ZNF215Q9UL58 517 aaPredicted RBP15.1■□□□□ 0.01
MRPL55-228ENST00000476267 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms