RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CYP27A1Q02318 531 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 LRRC63Q05C16 580 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 BTNL9Q6UXG8 535 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 MMRN2Q9H8L6 949 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 RGS17Q9UGC6 210 aaPredicted RBP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 HERC5Q9UII4 1024 aaKnown RBP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 RCCD1A6NED2 376 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 TRAF5O00463 557 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 MSH4O15457 936 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 SREBF1P36956 1147 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 CHMP4BP1P59074 171 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 CYP4A11Q02928 519 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 CCDC174Q6PII3 467 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 GPR161Q8N6U8 529 aaKnown RBP18.46■□□□□ 0.55
TVP23B-202ENST00000476139 RETREG2Q8NC44 543 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 GOLGA1Q92805 767 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 BCAS3Q9H6U6 928 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 SIK3Q9Y2K2 1263 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 DUSP10Q9Y6W6 482 aa18.46■□□□□ 0.55
TVP23B-202ENST00000476139 TBC1D8O95759 1140 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 CFBP00751 764 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 SLC12A3P55017 1021 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 GLIS2Q9BZE0 524 aaPredicted RBP18.45■□□□□ 0.54
TVP23B-202ENST00000476139 CNTNAP1P78357 1384 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 ENC1O14682 589 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 RHOXF2BP0C7M4 288 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 DPEP1P16444 411 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 UBXN2AP68543 259 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 Q4G0T1 1027 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 ZCWPW2Q504Y3 356 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 POTEAQ6S8J7 498 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 FAM151AQ8WW52 585 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 RHOXF2Q9BQY4 288 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 LACRTQ9GZZ8 138 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 COL4A5P29400 1685 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 MAN2A1Q16706 1144 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 SCFD1Q8WVM8 642 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 CDC23Q9UJX2 597 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 TMX2Q9Y320 296 aa18.45■□□□□ 0.54
TVP23B-202ENST00000476139 KRT18P05783 430 aaKnown RBP18.44■□□□□ 0.54
TVP23B-202ENST00000476139 MMP14P50281 582 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 CASP5P51878 434 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 CCDC122Q5T0U0 273 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 MOXD1Q6UVY6 613 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 KRT26Q7Z3Y9 468 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 ZNHIT6Q9NWK9 470 aaKnown RBP18.44■□□□□ 0.54
TVP23B-202ENST00000476139 ZNF76P36508 570 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 GYS2P54840 703 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 CCDC65Q8IXS2 484 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
TVP23B-202ENST00000476139 ARHGEF10LQ9HCE6 1279 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
TVP23B-202ENST00000476139 RGL1Q9NZL6 768 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 ZBTB21Q9ULJ3 1066 aa18.44■□□□□ 0.54
TVP23B-202ENST00000476139 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
TVP23B-202ENST00000476139 EML1O00423 815 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 FOSP01100 380 aaPredicted RBP18.43■□□□□ 0.54
TVP23B-202ENST00000476139 FKBP3Q00688 224 aaKnown RBP18.43■□□□□ 0.54
TVP23B-202ENST00000476139 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 NAPGQ99747 312 aaPredicted RBP18.43■□□□□ 0.54
TVP23B-202ENST00000476139 TSG101Q99816 390 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 KIF20AO95235 890 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 SRGAP1Q7Z6B7 1085 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 DEFB132Q7Z7B7 95 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 RABGGTAQ92696 567 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 ARFGAP3Q9NP61 516 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 FBXO28Q9NVF7 368 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 HDAC6Q9UBN7 1215 aa18.43■□□□□ 0.54
TVP23B-202ENST00000476139 SHTN1A0MZ66 631 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 ZNF263O14978 683 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 FGFR1OPO95684 399 aaKnown RBP18.42■□□□□ 0.54
TVP23B-202ENST00000476139 RPA1P27694 616 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 FIGNQ5HY92 759 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 HAUS3Q68CZ6 603 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 SUGCTQ9HAC7 445 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 HDAC9Q9UKV0 1011 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 APBA1Q02410 837 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 KCNMA1Q12791 1236 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 GIT2Q14161 759 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 NBPF9Q3BBW0 867 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 PNKPQ96T60 521 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 KCTD10Q9H3F6 313 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 HAUS4Q9H6D7 363 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 ARHGAP20Q9P2F6 1191 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 VAV3Q9UKW4 847 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 PLAGL2Q9UPG8 496 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 DNM3Q9UQ16 869 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 COL4A3BPQ9Y5P4 624 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 A0A1W2PQJ5 194 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 TBX3O15119 743 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 CIITAP33076 1130 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 KIAA1328Q86T90 577 aa18.42■□□□□ 0.54
TVP23B-202ENST00000476139 ZBTB39O15060 712 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms