RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FGFR2P21802 821 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 SSTR4P31391 388 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 GRIK1P39086 918 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 IL15P40933 162 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 GYG1P46976 350 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 RBM25P49756 843 aaKnown RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 GTF2A2P52657 109 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 MTX1Q13505 466 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 RASA3Q14644 834 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 ATP2B3Q16720 1220 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 INTS3Q68E01 1043 aaKnown RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 PI16Q6UXB8 463 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF296Q8WUU4 475 aaPredicted RBP5.14□□□□□ -1.59
VPS13D-206ENST00000476045 PSMG3-AS1Q96PY0 264 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 YIPF2Q9BWQ6 316 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 BCO2Q9BYV7 579 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 USP44Q9H0E7 712 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 KCNF1Q9H3M0 494 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 SEMA6CQ9H3T2 930 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 DENND2AQ9ULE3 1009 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 TNNQ9UQP3 1299 aa5.14□□□□□ -1.59
VPS13D-206ENST00000476045 MYH1P12882 1939 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PNMA6FA0A0J9YX94 578 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 WTIPA6NIX2 430 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 ADAMTS4O75173 837 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 LDHBP07195 334 aaKnown RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 CETPP11597 493 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 FOSL1P15407 271 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 MAPK1P28482 360 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 RFX5P48382 616 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PRMT2P55345 433 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF252P-AS1Q0IIN9 211 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 CHAF1AQ13111 956 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PPIL2Q13356 520 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 MVPQ14764 893 aaKnown RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 SPTY2D1Q68D10 685 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 TMED8Q6PL24 325 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PAOXQ6QHF9 649 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 DLK2Q6UY11 383 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 NFXL1Q6ZNB6 911 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 MOB2Q70IA6 237 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 ERO1BQ86YB8 467 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 FBLIM1Q8WUP2 373 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PRMT6Q96LA8 375 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 MFSD14AQ96MC6 490 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 TEPSINQ96N21 525 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF341Q9BYN7 854 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PUS3Q9BZE2 481 aaKnown RBP5.13□□□□□ -1.59
VPS13D-206ENST00000476045 COPRSQ9NQ92 184 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 FAM105AQ9NUU6 356 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 CRIM1Q9NZV1 1036 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 PPM1HQ9ULR3 514 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 AKAP2Q9Y2D5 859 aa5.13□□□□□ -1.59
VPS13D-206ENST00000476045 RANBP2P49792 3224 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 SIPA1L1O43166 1804 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 MYO5AQ9Y4I1 1855 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CUL9Q8IWT3 2517 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CCL15-CCL14A0A0B4J2E2 113 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 SNAP23O00161 211 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 IGF2BP3O00425 579 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 GIPC1O14908 333 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 ZNF862O60290 1169 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 GSTP1P09211 210 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 ADMP35318 185 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 RARSP54136 660 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 PPATQ06203 517 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 SNAPC2Q13487 334 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 VGLL4Q14135 290 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 MAP7Q14244 749 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 PDE3AQ14432 1141 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 KIF22Q14807 665 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 TAF1CQ15572 869 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CCL15Q16663 113 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 LRRC24Q50LG9 513 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 NOL9Q5SY16 702 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 NBPF12Q5TAG4 269 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 PRAMEF18Q5VWM3 479 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 SCARA3Q6AZY7 606 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 DZIP1Q86YF9 867 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CERS3Q8IU89 383 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 GCC1Q96CN9 775 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 OPTNQ96CV9 577 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CLMNQ96JQ2 1002 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 WRNIP1Q96S55 665 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 PARK7Q99497 189 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 TMEM39BQ9GZU3 492 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 CCDC86Q9H6F5 360 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 TDRD3Q9H7E2 651 aaKnown RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 C1GALT1Q9NS00 363 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 TMEM39AQ9NV64 488 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 BIN2Q9UBW5 565 aaPredicted RBP5.12□□□□□ -1.59
VPS13D-206ENST00000476045 JAG2Q9Y219 1238 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 GAKO14976 1311 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 ATRNL1Q5VV63 1379 aa5.12□□□□□ -1.59
VPS13D-206ENST00000476045 ZSWIM8A7E2V4 1837 aa5.11□□□□□ -1.59
VPS13D-206ENST00000476045 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
VPS13D-206ENST00000476045 WDR64B1ANS9 1081 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms