RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 IKQ13123 557 aaPredicted RBP17.57■□□□□ 0.4
DFFB-208ENST00000475969 QRICH1Q2TAL8 776 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 TTC19Q6DKK2 380 aaPredicted RBP17.57■□□□□ 0.4
DFFB-208ENST00000475969 PDXDC1Q6P996 788 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
DFFB-208ENST00000475969 C15orf52Q6ZUT6 534 aaKnown RBP17.57■□□□□ 0.4
DFFB-208ENST00000475969 FAM133AQ8N9E0 248 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
DFFB-208ENST00000475969 IKZF4Q9H2S9 585 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
DFFB-208ENST00000475969 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 ZBTB5O15062 677 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 RGL2O15211 777 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 TOM1O60784 492 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 MED24O75448 989 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 BBOX1O75936 387 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 NOL4O94818 638 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 SNHG28P0DPA3 235 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 ACTN2P35609 894 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
DFFB-208ENST00000475969 PRR16Q569H4 304 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 FIGNQ5HY92 759 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 FAM83BQ5T0W9 1011 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 HGSNATQ68CP4 663 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 CCDC84Q86UT8 332 aaPredicted RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 TBC1D5Q92609 795 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 GDF11O95390 407 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 LRRC63Q05C16 580 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 PDIA5Q14554 519 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 LEKR1Q6ZMV7 388 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 DNAJC18Q9H819 358 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 ADAMTS1Q9UHI8 967 aa17.56■□□□□ 0.4
DFFB-208ENST00000475969 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
DFFB-208ENST00000475969 IGKV6D-41A0A0C4DH26 115 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 ANO9A1A5B4 782 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 TUBB4BP68371 445 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 EHHADHQ08426 723 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 SCFD1Q8WVM8 642 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 TLR10Q9BXR5 811 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 TSGA10Q9BZW7 698 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.55■□□□□ 0.4
DFFB-208ENST00000475969 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
DFFB-208ENST00000475969 EEF2P13639 858 aaKnown RBP17.55■□□□□ 0.4
DFFB-208ENST00000475969 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 HOXA13P31271 388 aaPredicted RBP17.55■□□□□ 0.4
DFFB-208ENST00000475969 PPP1R2P41236 205 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 NOVP48745 357 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 C10orf67Q8IYJ2 551 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 EHD4Q9H223 541 aa17.55■□□□□ 0.4
DFFB-208ENST00000475969 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
DFFB-208ENST00000475969 ZC3H4Q9UPT8 1303 aaKnown RBP17.55■□□□□ 0.4
DFFB-208ENST00000475969 AGPSO00116 658 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 HNRNPH3P31942 346 aaKnown RBP17.54■□□□□ 0.4
DFFB-208ENST00000475969 EPS15P42566 896 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 CLK2P49760 499 aaKnown RBP17.54■□□□□ 0.4
DFFB-208ENST00000475969 ADAM9Q13443 819 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 MAP9Q49MG5 647 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 PPP4R3AQ6IN85 833 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 SPICE1Q8N0Z3 855 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 ALS2CR12Q96Q35 445 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 ADAMTSL1Q8N6G6 1762 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 A0A087X0T9 212 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
DFFB-208ENST00000475969 PALMO75781 387 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 FGFR1OPO95684 399 aaKnown RBP17.54■□□□□ 0.4
DFFB-208ENST00000475969 FAM228BP0C875 321 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 KLRC1P26715 233 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 CDK17Q00537 523 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 ZCWPW2Q504Y3 356 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 KLHDC7AQ5VTJ3 777 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
DFFB-208ENST00000475969 RSPH10B2B2RC85 870 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 CYP11B2P19099 503 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 SEPT2Q15019 361 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 TRADDQ15628 312 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 CDC37Q16543 378 aaPredicted RBP17.53■□□□□ 0.4
DFFB-208ENST00000475969 ARSHQ5FYA8 562 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
DFFB-208ENST00000475969 ZNF662Q6ZS27 426 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 GOLGA5Q8TBA6 731 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 POLRMTO00411 1230 aaKnown RBP17.53■□□□□ 0.4
DFFB-208ENST00000475969 PRPF6O94906 941 aaKnown RBP17.53■□□□□ 0.4
DFFB-208ENST00000475969 TRIM37O94972 964 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 SLC9A1P19634 815 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 KCNA1Q09470 495 aa17.53■□□□□ 0.4
DFFB-208ENST00000475969 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms