RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 IQCF3P0C7M6 154 aa15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 TAP1Q03518 808 aa15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 QRICH1Q2TAL8 776 aa15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 CPLX2Q6PUV4 134 aaKnown RBP15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 RNF26Q9BY78 433 aaPredicted RBP15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 GJB4Q9NTQ9 266 aa15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 ADD3Q9UEY8 706 aaKnown RBP15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.41■□□□□ 0.06
TUBA4A-209ENST00000475683 PNMA6FA0A0J9YX94 578 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 PFKMP08237 780 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 SUPT20HL2P0C7V6 817 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 EDNRBP24530 442 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 CPT1AP50416 773 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 CHMP4BP1P59074 171 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 RPS6P62753 249 aaKnown RBP15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 GPNMBQ14956 572 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 CDC37Q16543 378 aaPredicted RBP15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 TCTN1Q2MV58 587 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 ARNTL2Q8WYA1 636 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 RRP36Q96EU6 259 aaKnown RBP15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 IPO9Q96P70 1041 aaKnown RBP15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 CTAGE1Q96RT6 745 aa15.4■□□□□ 0.06
TUBA4A-209ENST00000475683 LCHNA4D1U4 455 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 ZBTB5O15062 677 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 CDKL5O76039 1030 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 FOSBP53539 338 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 PFKFB3Q16875 520 aaPredicted RBP15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 HERC6Q8IVU3 1022 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 TBC1D5Q92609 795 aa15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 GPKOWQ92917 476 aaPredicted RBP eCLIP15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 TSPYL2Q9H2G4 693 aaPredicted RBP15.39■□□□□ 0.05
TUBA4A-209ENST00000475683 MICAL3Q7RTP6 2002 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 A6NJR5 290 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 ADAMTS3O15072 1205 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 LPXNO60711 386 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 DEXIO95424 95 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 SCG2P13521 617 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 POU3F3P20264 500 aaPredicted RBP15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 PLA2G5P39877 138 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 AKAP17AQ02040 695 aaKnown RBP15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 PDE4DQ08499 809 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 GRB10Q13322 594 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 WWC2Q6AWC2 1192 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 TYW1BQ6NUM6 668 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 NFRKBQ6P4R8 1299 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 TRIM22Q8IYM9 498 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 SLC9A7Q96T83 725 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 ALG1Q9BT22 464 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 STK36Q9NRP7 1315 aa15.38■□□□□ 0.05
TUBA4A-209ENST00000475683 PITPNM1O00562 1244 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 TXNP10599 105 aaKnown RBP15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 ACTN1P12814 892 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 DEFB103AP81534 67 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 HMGN5P82970 282 aaKnown RBP15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 USH1GQ495M9 461 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 GDF6Q6KF10 455 aaPredicted RBP15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 GDPD5Q8WTR4 605 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 SCFD2Q8WU76 684 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 DHX38Q92620 1227 aaKnown RBP15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 DOCK5Q9H7D0 1870 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 ATG2AQ2TAZ0 1938 aa15.37■□□□□ 0.05
TUBA4A-209ENST00000475683 LOC102724159A0A0B4J2E5 919 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 STXBP3O00186 592 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 RFC2P35250 354 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 PWP2Q15269 919 aaKnown RBP15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 HEATR3Q7Z4Q2 680 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 FAM184AQ8NB25 1140 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 AFG1LQ8WV93 481 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 KAT2BQ92831 832 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 VPS54Q9P1Q0 977 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 COL20A1Q9P218 1284 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 SEC63Q9UGP8 760 aaKnown RBP15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 KCNJ14Q9UNX9 436 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 PCDHA1Q9Y5I3 950 aa15.36■□□□□ 0.05
TUBA4A-209ENST00000475683 NKRFO15226 690 aaKnown RBP eCLIP15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 TLL1O43897 1013 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 MMP3P08254 477 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 WDR5P61964 334 aaKnown RBP15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 PTGISQ16647 500 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 LARP1BQ659C4 914 aaKnown RBP15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 CCDC62Q6P9F0 684 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 RETREG2Q8NC44 543 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 PHOSPHO2Q8TCD6 241 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 AMNQ9BXJ7 453 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 BARHL2Q9NY43 387 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 DAXXQ9UER7 740 aaPredicted RBP15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 NLRC5Q86WI3 1866 aa15.35■□□□□ 0.05
TUBA4A-209ENST00000475683 OPLAHO14841 1288 aa15.34■□□□□ 0.05
TUBA4A-209ENST00000475683 SYT1P21579 422 aa15.34■□□□□ 0.05
TUBA4A-209ENST00000475683 DDIT3P35638 169 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms