RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 FARP2O94887 1054 aaPredicted RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 METTL7BQ6UX53 244 aa25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 DHX37Q8IY37 1157 aaKnown RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 U2AF1L4Q8WU68 220 aaKnown RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 UIMC1Q96RL1 719 aa25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 OGDHLQ9ULD0 1010 aa25.11■■□□□ 1.61
MCF2L2-209ENST00000475664 TBX3O15119 743 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 SGPL1O95470 568 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 PGK1P00558 417 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 LAMC2Q13753 1193 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 CYFIP1Q7L576 1253 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 TNS4Q8IZW8 715 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 HAS1Q92839 578 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 TMEM106CQ9BVX2 250 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 AP5M1Q9H0R1 490 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 TMEM60Q9H2L4 133 aa25.1■■□□□ 1.61
MCF2L2-209ENST00000475664 KIAA0100Q14667 2235 aaKnown RBP25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 MYADML2A6NDP7 307 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 SORBS3O60504 671 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 GJA8P48165 433 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 IRX5P78411 483 aaPredicted RBP25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 NUCB2P80303 420 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 CALCRLQ16602 461 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 GJA10Q969M2 543 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 FAM20AQ96MK3 541 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 MTMR9Q96QG7 549 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 RIT2Q99578 217 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 SDF4Q9BRK5 362 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 MLXIPQ9HAP2 919 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 TBC1D22BQ9NU19 505 aa25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 CIZ1Q9ULV3 898 aaPredicted RBP25.09■■□□□ 1.61
MCF2L2-209ENST00000475664 PSMD10O75832 226 aa25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 C6orf222P0C671 652 aaPredicted RBP25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 CST5P28325 142 aaPredicted RBP25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 C4orf32Q8N8J7 132 aa25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 KLHDC9Q8NEP7 349 aa25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 AFG1LQ8WV93 481 aa25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 SPC25Q9HBM1 224 aa25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 JPH1Q9HDC5 661 aaPredicted RBP25.08■■□□□ 1.61
MCF2L2-209ENST00000475664 LRRC41Q15345 812 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 FSCN1Q16658 493 aaKnown RBP25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 HSDL1Q3SXM5 330 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 LRCH2Q5VUJ6 765 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 PPTC7Q8NI37 304 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 SPATA33Q96N06 139 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 SLC9A2Q9UBY0 812 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 TELO2Q9Y4R8 837 aa25.07■■□□□ 1.6
MCF2L2-209ENST00000475664 A6NJR5 290 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 DDX39AO00148 427 aaKnown RBP25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 GAS7O60861 476 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 OR52Z1P0C646 297 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 CPT1AP50416 773 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 PTGDRQ13258 359 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 SLFN12Q8IYM2 578 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 ARRDC4Q8NCT1 418 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 TEKT3Q9BXF9 490 aa25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 FTOQ9C0B1 505 aaKnown RBP eCLIP25.06■■□□□ 1.6
MCF2L2-209ENST00000475664 BAG4O95429 457 aaKnown RBP25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 CCNE2O96020 404 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 MMP3P08254 477 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 HOXD8P13378 290 aaPredicted RBP25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 BEX3Q00994 111 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 SP4Q02446 784 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 CCSAPQ6IQ19 270 aaPredicted RBP25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 B3GNT9Q6UX72 402 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 RNF180Q86T96 592 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 USP28Q96RU2 1077 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 GPR20Q99678 358 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 VAV3Q9UKW4 847 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 BRCA2P51587 3418 aa25.05■■□□□ 1.6
MCF2L2-209ENST00000475664 WDR81Q562E7 1941 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 LAD1O00515 517 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 MARCH6O60337 910 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 TFRCP02786 760 aaKnown RBP25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 CAPN2P17655 700 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 ATP2C1P98194 919 aaPredicted RBP25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 KRT76Q01546 638 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 SF3A1Q15459 793 aaKnown RBP25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 GNASQ5JWF2 1037 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 ZNF746Q6NUN9 644 aaPredicted RBP25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 ZNF396Q96N95 335 aaPredicted RBP25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 CLIC4Q9Y696 253 aa25.04■■□□□ 1.6
MCF2L2-209ENST00000475664 DNM1LO00429 736 aa25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 NOP56O00567 594 aaKnown RBP25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 BMP15O95972 392 aa25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 ACTR2P61160 394 aa25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 BRDTQ58F21 947 aaPredicted RBP25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 UNC45AQ9H3U1 944 aa25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 ELP1O95163 1332 aa25.03■■□□□ 1.6
MCF2L2-209ENST00000475664 GSTTP1A0A1W2PQM5 241 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 MYCNP04198 464 aaPredicted RBP25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 PRPHP41219 470 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 TXKP42681 527 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 MNX1P50219 401 aaPredicted RBP25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 SPIRE1Q08AE8 756 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 PPP2R5CQ13362 524 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 PTPAQ15257 358 aa25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 FOXD4L6Q3SYB3 417 aaPredicted RBP25.02■■□□□ 1.6
MCF2L2-209ENST00000475664 FOXD4L3Q6VB84 417 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms