RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 PLVAPQ9BX97 442 aa16.33■□□□□ 0.2
FAM3A-218ENST00000475657 INCENPQ9NQS7 918 aa16.33■□□□□ 0.2
FAM3A-218ENST00000475657 FAM86C1Q9NVL1 165 aa16.33■□□□□ 0.2
FAM3A-218ENST00000475657 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
FAM3A-218ENST00000475657 GVINP1Q7Z2Y8 2422 aa16.32■□□□□ 0.2
FAM3A-218ENST00000475657 ASIC4Q96FT7 647 aa16.32■□□□□ 0.2
FAM3A-218ENST00000475657 RMDN3Q96TC7 470 aa16.32■□□□□ 0.2
FAM3A-218ENST00000475657 MRVI1Q9Y6F6 885 aa16.32■□□□□ 0.2
FAM3A-218ENST00000475657 LINC01565O15544 149 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.2
FAM3A-218ENST00000475657 NDUFV1P49821 464 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 VCPP55072 806 aaKnown RBP16.31■□□□□ 0.2
FAM3A-218ENST00000475657 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 KCNV1Q6PIU1 500 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 MCF2L2Q86YR7 1114 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 ATP6V0A1Q93050 837 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 TTC14Q96N46 770 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 C16orf70Q9BSU1 422 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 IGFLR1Q9H665 355 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
FAM3A-218ENST00000475657 CLEC1BQ9P126 229 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 NLRC5Q86WI3 1866 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
FAM3A-218ENST00000475657 ABCB11O95342 1321 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 ADGRA3Q8IWK6 1321 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 C17orf102A2RUQ5 167 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 RBAK-RBAKDNI3L0D1 243 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 FOXP2O15409 715 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 CAMK1Q14012 370 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 NAALADL2Q58DX5 795 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 GPATCH4Q5T3I0 446 aaKnown RBP16.3■□□□□ 0.2
FAM3A-218ENST00000475657 TBC1D5Q92609 795 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 P2RX5Q93086 422 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 PHF7Q9BWX1 381 aaPredicted RBP16.3■□□□□ 0.2
FAM3A-218ENST00000475657 PLAGL2Q9UPG8 496 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
FAM3A-218ENST00000475657 NR3C2P08235 984 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 ICAM3P32942 547 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 HSDL1Q3SXM5 330 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 USH1GQ495M9 461 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 CELF3Q5SZQ8 465 aaKnown RBP16.29■□□□□ 0.2
FAM3A-218ENST00000475657 ARHGEF16Q5VV41 709 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 OSBPL7Q9BZF2 842 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 MYO15AQ9UKN7 3530 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 KIAA1217Q5T5P2 1943 aa16.29■□□□□ 0.2
FAM3A-218ENST00000475657 H3BRB1 525 aa16.28■□□□□ 0.2
FAM3A-218ENST00000475657 TREHO43280 583 aa16.28■□□□□ 0.2
FAM3A-218ENST00000475657 TGFB3P10600 412 aa16.28■□□□□ 0.2
FAM3A-218ENST00000475657 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
FAM3A-218ENST00000475657 ZNF689Q96CS4 500 aaPredicted RBP16.28■□□□□ 0.2
FAM3A-218ENST00000475657 SPATA33Q96N06 139 aa16.28■□□□□ 0.2
FAM3A-218ENST00000475657 TUT1Q9H6E5 874 aaKnown RBP16.28■□□□□ 0.2
FAM3A-218ENST00000475657 H0Y858 1186 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
FAM3A-218ENST00000475657 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 GNAT1P11488 350 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 EIF2AK2P19525 551 aaKnown RBP16.27■□□□□ 0.2
FAM3A-218ENST00000475657 NBL1P41271 181 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 ALX1Q15699 326 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 ASCL5Q7RTU5 278 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 PI4K2BQ8TCG2 481 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 PXMP2Q9NR77 195 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 TLR9Q9NR96 1032 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 USP15Q9Y4E8 981 aaPredicted RBP16.27■□□□□ 0.2
FAM3A-218ENST00000475657 DCHS1Q96JQ0 3298 aa16.27■□□□□ 0.2
FAM3A-218ENST00000475657 ATG2AQ2TAZ0 1938 aa16.27■□□□□ 0.19
FAM3A-218ENST00000475657 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 RGS20O76081 388 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 CTSHP09668 335 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
FAM3A-218ENST00000475657 GHRHRQ02643 423 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 HDAC1Q13547 482 aaPredicted RBP16.26■□□□□ 0.19
FAM3A-218ENST00000475657 BTG3Q14201 252 aaPredicted RBP16.26■□□□□ 0.19
FAM3A-218ENST00000475657 PTPN21Q16825 1174 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
FAM3A-218ENST00000475657 MRPL11Q9Y3B7 192 aaKnown RBP16.26■□□□□ 0.19
FAM3A-218ENST00000475657 PLXNA3P51805 1871 aa16.25■□□□□ 0.19
FAM3A-218ENST00000475657 GGPS1O95749 300 aa16.25■□□□□ 0.19
FAM3A-218ENST00000475657 CDC37Q16543 378 aaPredicted RBP16.25■□□□□ 0.19
FAM3A-218ENST00000475657 SPPL3Q8TCT6 385 aa16.25■□□□□ 0.19
FAM3A-218ENST00000475657 SUSD6Q92537 303 aa16.25■□□□□ 0.19
FAM3A-218ENST00000475657 EHMT1Q9H9B1 1298 aa16.25■□□□□ 0.19
FAM3A-218ENST00000475657 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
FAM3A-218ENST00000475657 TTC41PQ6P2S7 1318 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 ENPP3O14638 875 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 DGKIO75912 1065 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 GLP2RO95838 553 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
FAM3A-218ENST00000475657 DNAJB1P25685 340 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 ADAM17P78536 824 aa16.24■□□□□ 0.19
FAM3A-218ENST00000475657 ANKRD45Q5TZF3 282 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms