RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 LONP1P36776 959 aaKnown RBP7.95□□□□□ -1.14
SHQ1-207ENST00000475558 STAT3P40763 770 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 GHRHRQ02643 423 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 SEMA3FQ13275 785 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 GRB14Q14449 540 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 PDIA5Q14554 519 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 SHROOM1Q2M3G4 852 aaPredicted RBP7.95□□□□□ -1.14
SHQ1-207ENST00000475558 TTC38Q5R3I4 469 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 GJC2Q5T442 439 aaPredicted RBP7.95□□□□□ -1.14
SHQ1-207ENST00000475558 OLFML2BQ68BL8 750 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 DTHD1Q6ZMT9 781 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 CCDC73Q6ZRK6 1079 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 PIK3AP1Q6ZUJ8 805 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 DPP9Q86TI2 863 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 CLEC10AQ8IUN9 316 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF454Q8N9F8 522 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 NPLOC4Q8TAT6 608 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 PIBF1Q8WXW3 757 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 TIGD1Q96MW7 591 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 CCPG1Q9ULG6 757 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 VPS9D1Q9Y2B5 631 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 TTC28Q96AY4 2481 aa7.95□□□□□ -1.14
SHQ1-207ENST00000475558 MYH1P12882 1939 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 LOC102724159A0A0B4J2E5 919 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 FAM237AA0A1B0GTK4 181 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 GOLGA8CPA6NN73 597 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 KIF28PB7ZC32 967 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 MARCH6O60337 910 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 STAM2O75886 525 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CAVIN2O95810 425 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CYP3A4P08684 503 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CYBAP13498 195 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CIITAP33076 1130 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 TXLNAP40222 546 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 FOSBP53539 338 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 NR5A1Q13285 461 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 PWP2Q15269 919 aaKnown RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 NPY5RQ15761 445 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 ZYXQ15942 572 aaKnown RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 SLC35G1Q2M3R5 365 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 FOXD4L6Q3SYB3 417 aaPredicted RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 C9orf50Q5SZB4 431 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 FOXD4L3Q6VB84 417 aaPredicted RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 TRPV1Q8NER1 839 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 MYLIPQ8WY64 445 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 MRPS27Q92552 414 aaKnown RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 GPKOWQ92917 476 aaPredicted RBP eCLIP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 BADQ92934 168 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 FAM20AQ96MK3 541 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 NUP88Q99567 741 aaPredicted RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 TEX13BQ9BXU2 312 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 GTPBP4Q9BZE4 634 aaKnown RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 PRDM5Q9NQX1 630 aaPredicted RBP7.94□□□□□ -1.14
SHQ1-207ENST00000475558 SLC5A4Q9NY91 659 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 BTBD7Q9P203 1132 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 CLIC4Q9Y696 253 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 NAV1Q8NEY1 1877 aa7.94□□□□□ -1.14
SHQ1-207ENST00000475558 RLFQ13129 1914 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 MEIS2O14770 477 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 SEPT4O43236 478 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 IGHA2P01877 340 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 FOSL2P15408 326 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 ZNF76P36508 570 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TOB1P50616 345 aaPredicted RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 ATP2C1P98194 919 aaPredicted RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 CEBPZQ03701 1054 aaKnown RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 PTGDRQ13258 359 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 SNX17Q15036 470 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 PTPAQ15257 358 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TMEM266Q2M3C6 531 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TRIM60Q495X7 471 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 Q4G0T1 1027 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 C1orf53Q5VUE5 145 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 NIPA1Q7RTP0 329 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 SHCBP1Q8NEM2 672 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TBCKQ8TEA7 893 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TRERF1Q96PN7 1200 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 LRRC27Q9C0I9 530 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 TTYH1Q9H313 450 aaPredicted RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 MROH8Q9H579 483 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 PDLIM7Q9NR12 457 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 GJB4Q9NTQ9 266 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 CCDC39Q9UFE4 941 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 PCDHA7Q9UN72 937 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 VCANP13611 3396 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 LTBP2Q14767 1821 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 FOCADQ5VW36 1801 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 CDK5RAP2Q96SN8 1893 aa7.93□□□□□ -1.14
SHQ1-207ENST00000475558 BAZ2AQ9UIF9 1905 aaKnown RBP7.93□□□□□ -1.14
SHQ1-207ENST00000475558 CCNT1O60563 726 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 KINO60870 393 aaKnown RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 PPP1R11O60927 126 aaPredicted RBP7.92□□□□□ -1.14
SHQ1-207ENST00000475558 MYL1P05976 194 aa7.92□□□□□ -1.14
SHQ1-207ENST00000475558 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms