RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-207ENST00000475549 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 RASEFQ8IZ41 740 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 CCDC82Q8N4S0 544 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 FANCBQ8NB91 859 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 ATXN2LQ8WWM7 1075 aaKnown RBP8.11□□□□□ -1.11
HDAC3-207ENST00000475549 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
HDAC3-207ENST00000475549 ASB2Q96Q27 587 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 MTA3Q9BTC8 594 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 KATNAL1Q9BW62 490 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 TUT1Q9H6E5 874 aaKnown RBP8.11□□□□□ -1.11
HDAC3-207ENST00000475549 SETD4Q9NVD3 440 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 MTCH2Q9Y6C9 303 aa8.11□□□□□ -1.11
HDAC3-207ENST00000475549 ABHD14A-ACY1A0A1B0GW23 586 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 RSPH10B2B2RC85 870 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 GJB5O95377 273 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 RSPH10BP0C881 870 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 BMP1P13497 986 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 KIF5BP33176 963 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 THPOP40225 353 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 LIFRP42702 1097 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 ADAM17P78536 824 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TFF2Q03403 129 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 FUT2Q10981 343 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TRAF1Q13077 416 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 CNKSR3Q6P9H4 555 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 SGMS1Q86VZ5 419 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TMTC2Q8N394 836 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 DBF4BQ8NFT6 615 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 ARNTL2Q8WYA1 636 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 ATP6V0A1Q93050 837 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 TCEANC2Q96MN5 208 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 LZTS2Q9BRK4 669 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 USP26Q9BXU7 913 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 PSTPIP2Q9H939 334 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 BRPF3Q9ULD4 1205 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 LAMA4Q16363 1823 aa8.1□□□□□ -1.11
HDAC3-207ENST00000475549 GSTTP1A0A1W2PQM5 241 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 C17orf102A2RUQ5 167 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 FIBPO43427 364 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 TLL1O43897 1013 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 LGR5O75473 907 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 STAM2O75886 525 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 KCNA2P16389 499 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 MRPS5P82675 430 aaKnown RBP8.09□□□□□ -1.11
HDAC3-207ENST00000475549 GRB10Q13322 594 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 NEDD9Q14511 834 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 UBE2SQ16763 222 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 GNPTABQ3T906 1256 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 BMP2KLQ5H9B9 411 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 CASC1Q6TDU7 716 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 NFXL1Q6ZNB6 911 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 TMTC3Q6ZXV5 915 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 CTCFLQ8NI51 663 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-207ENST00000475549 SMARCC2Q8TAQ2 1214 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 CYP2W1Q8TAV3 490 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 NECAB3Q96P71 396 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-207ENST00000475549 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 SUGCTQ9HAC7 445 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 ANO2Q9NQ90 1003 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-207ENST00000475549 UBIAD1Q9Y5Z9 338 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
HDAC3-207ENST00000475549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-207ENST00000475549 LINC01553A4QN01 128 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 CCDC69A6NI79 296 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 KIF28PB7ZC32 967 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 NOP56O00567 594 aaKnown RBP8.08□□□□□ -1.12
HDAC3-207ENST00000475549 ADAMTS3O15072 1205 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
HDAC3-207ENST00000475549 CHRNA1P02708 482 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 KCNJ6P48051 423 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 GNAQP50148 359 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 KCNQ1P51787 676 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 SP4Q02446 784 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 IKBKEQ14164 716 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 TSGA10IPQ3SY00 556 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 PLEKHG4Q58EX7 1191 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 MARCH8Q5T0T0 291 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 UTP14CQ5TAP6 766 aaKnown RBP8.08□□□□□ -1.12
HDAC3-207ENST00000475549 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 FAM117BQ6P1L5 589 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 XRRA1Q6P2D8 792 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 RUFY4Q6ZNE9 571 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 MICALL1Q8N3F8 863 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 ADAMTS19Q8TE59 1207 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 LMBR1Q8WVP7 490 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
HDAC3-207ENST00000475549 ZBTB10Q96DT7 871 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 NEK1Q96PY6 1258 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 PCYT2Q99447 389 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 RAD9AQ99638 391 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 THEGQ9P2T0 379 aa8.08□□□□□ -1.12
HDAC3-207ENST00000475549 SEC63Q9UGP8 760 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms