RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 OPLAHO14841 1288 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 FIBPO43427 364 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 RB1P06400 928 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 GRM4Q14833 912 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 RPAINQ86UA6 219 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 MYOCDQ8IZQ8 938 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 GDPD5Q8WTR4 605 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 CDHR1Q96JP9 859 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
TTC38-206ENST00000475467 MTA3Q9BTC8 594 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 EPHX3Q9H6B9 360 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 PTPRSQ13332 1948 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 MICAL3Q7RTP6 2002 aa14.3□□□□□ -0.12
TTC38-206ENST00000475467 H3BNC9 293 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 LGALS2P05162 132 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
TTC38-206ENST00000475467 MBTPS1Q14703 1052 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 TAF2Q6P1X5 1199 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 TEX2Q8IWB9 1127 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 FAM178BQ8IXR5 827 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 GJD3Q8N144 294 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
TTC38-206ENST00000475467 YME1L1Q96TA2 773 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 LZTS2Q9BRK4 669 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 LMAN2LQ9H0V9 348 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 KCNH6Q9H252 994 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 FRMPD4Q14CM0 1322 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 NRCAMQ92823 1304 aa14.29□□□□□ -0.12
TTC38-206ENST00000475467 PRR33A8MZF0 331 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 MAFGO15525 162 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 SMIM10L2AP0DMW4 78 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 SMIM10L2BP0DMW5 78 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 EPC2Q52LR7 807 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 FAM26DQ5JW98 314 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 RALYLQ86SE5 291 aaKnown RBP14.28□□□□□ -0.12
TTC38-206ENST00000475467 RSPH3Q86UC2 560 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 NLRX1Q86UT6 975 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 NCOA7Q8NI08 942 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 NEK9Q8TD19 979 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 CUL5Q93034 780 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
TTC38-206ENST00000475467 MTUS1Q9ULD2 1270 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 XIRP2A4UGR9 3374 aa14.28□□□□□ -0.12
TTC38-206ENST00000475467 COL4A4P53420 1690 aaPredicted RBP14.27□□□□□ -0.12
TTC38-206ENST00000475467 GRXCR2A6NFK2 248 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 PPP1R11O60927 126 aaPredicted RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 KCNA5P22460 613 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 HOXA13P31271 388 aaPredicted RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 KIF5BP33176 963 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 GNAQP50148 359 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 SP2Q02086 613 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 TROAPQ12815 778 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 COL19A1Q14993 1142 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 WTAPQ15007 396 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
TTC38-206ENST00000475467 CATIPQ7Z7H3 387 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 HOMER1Q86YM7 354 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 TMEM192Q8IY95 271 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 TMTC2Q8N394 836 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 BANK1Q8NDB2 785 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 PIGSQ96S52 555 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 UPF3BQ9BZI7 483 aaKnown RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 NSUN3Q9H649 340 aaKnown RBP14.27□□□□□ -0.13
TTC38-206ENST00000475467 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
TTC38-206ENST00000475467 C5orf67F2Z3F1 127 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 TREHO43280 583 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 GPM6BQ13491 265 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 PTCRAQ6ISU1 281 aaPredicted RBP14.26□□□□□ -0.13
TTC38-206ENST00000475467 FAM117BQ6P1L5 589 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
TTC38-206ENST00000475467 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.26□□□□□ -0.13
TTC38-206ENST00000475467 WNT8BQ93098 351 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 GPR20Q99678 358 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 C11orf84Q9BUA3 381 aaPredicted RBP14.26□□□□□ -0.13
TTC38-206ENST00000475467 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
TTC38-206ENST00000475467 ADAM17P78536 824 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 CYFIP1Q7L576 1253 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 SPRED2Q7Z698 418 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 SMARCC2Q8TAQ2 1214 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 GPRASP2Q96D09 838 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 RRP36Q96EU6 259 aaKnown RBP14.25□□□□□ -0.13
TTC38-206ENST00000475467 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 PLVAPQ9BX97 442 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 SPZ1Q9BXG8 430 aa14.25□□□□□ -0.13
TTC38-206ENST00000475467 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms