RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 LMAN2LQ9H0V9 348 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 KIAA1671Q9BY89 1806 aa20.94■□□□□ 0.94
RNF220-212ENST00000475378 A0A0D9SFI3 127 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 GRM6O15303 877 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 SORBS3O60504 671 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 CAND2O75155 1236 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 GGPS1O95749 300 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 RB1P06400 928 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 CLUL1Q15846 466 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 KCNV1Q6PIU1 500 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 MFSD6Q6ZSS7 791 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 EDAQ92838 391 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 EVI5LQ96CN4 794 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 PDCD2LQ9BRP1 358 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 ZKSCAN3Q9BRR0 538 aa20.93■□□□□ 0.94
RNF220-212ENST00000475378 TBX10O75333 385 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 SMIM10L2AP0DMW4 78 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 SMIM10L2BP0DMW5 78 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 CTNNB1P35222 781 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 SMAD4Q13485 552 aaKnown RBP20.92■□□□□ 0.94
RNF220-212ENST00000475378 MCMDC2Q4G0Z9 681 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 IER5LQ5T953 404 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 ZNF589Q86UQ0 364 aaPredicted RBP20.92■□□□□ 0.94
RNF220-212ENST00000475378 PNMA1Q8ND90 353 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 APBB2Q92870 758 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 RNPEPQ9H4A4 650 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 RC3H2Q9HBD1 1191 aaKnown RBP20.92■□□□□ 0.94
RNF220-212ENST00000475378 NEDD4P46934 1319 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 CACNA1HO95180 2353 aa20.92■□□□□ 0.94
RNF220-212ENST00000475378 H3BRB1 525 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 CFBP00751 764 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 CTSHP09668 335 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 UBA1P22314 1058 aaKnown RBP20.91■□□□□ 0.94
RNF220-212ENST00000475378 GTF2F1P35269 517 aaKnown RBP eCLIP20.91■□□□□ 0.94
RNF220-212ENST00000475378 BMPR1AP36894 532 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 FIBCD1Q8N539 461 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 IL17RAQ96F46 866 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 C11orf84Q9BUA3 381 aaPredicted RBP20.91■□□□□ 0.94
RNF220-212ENST00000475378 TUT1Q9H6E5 874 aaKnown RBP20.91■□□□□ 0.94
RNF220-212ENST00000475378 JMJD4Q9H9V9 463 aa20.91■□□□□ 0.94
RNF220-212ENST00000475378 LGALS2P05162 132 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 MYCLP12524 364 aaPredicted RBP20.9■□□□□ 0.94
RNF220-212ENST00000475378 PTPN5P54829 565 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 FAM26DQ5JW98 314 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 STOX1Q6ZVD7 989 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 VSIG10LQ86VR7 867 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 IL31RAQ8NI17 732 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 ESR2Q92731 530 aa20.9■□□□□ 0.94
RNF220-212ENST00000475378 GPKOWQ92917 476 aaPredicted RBP eCLIP20.9■□□□□ 0.94
RNF220-212ENST00000475378 CLP1Q92989 425 aaKnown RBP20.9■□□□□ 0.94
RNF220-212ENST00000475378 STXBP3O00186 592 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 LINC01565O15544 149 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 TGFB3P10600 412 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 TCF15Q12870 199 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 PGM5Q15124 567 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 MSLNLQ96KJ4 702 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.93
RNF220-212ENST00000475378 CD207Q9UJ71 328 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 RWDD3Q9Y3V2 267 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 PCDHB15Q9Y5E8 787 aa20.89■□□□□ 0.93
RNF220-212ENST00000475378 ADGRA3Q8IWK6 1321 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 BAZ2BQ9UIF8 2168 aaKnown RBP20.88■□□□□ 0.93
RNF220-212ENST00000475378 TMEM221A6NGB7 291 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 M0R296 226 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 ST18O60284 1047 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 ADAM17P78536 824 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 ADAM15Q13444 863 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 TRIM67Q6ZTA4 783 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 BCAS3Q9H6U6 928 aa20.88■□□□□ 0.93
RNF220-212ENST00000475378 ALG13Q9NP73 1137 aaKnown RBP20.88■□□□□ 0.93
RNF220-212ENST00000475378 MAP3K20Q9NYL2 800 aaKnown RBP20.88■□□□□ 0.93
RNF220-212ENST00000475378 MYO15AQ9UKN7 3530 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 CCDC171Q6TFL3 1326 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 EYA4O95677 639 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 MMP1P03956 469 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 CAMK1Q14012 370 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 ZNF689Q96CS4 500 aaPredicted RBP20.87■□□□□ 0.93
RNF220-212ENST00000475378 KAT14Q9H8E8 782 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 MLXIPQ9HAP2 919 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 VAT1LQ9HCJ6 419 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 SETD4Q9NVD3 440 aa20.87■□□□□ 0.93
RNF220-212ENST00000475378 LOXHD1Q8IVV2 1947 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 PPP1R11O60927 126 aaPredicted RBP20.86■□□□□ 0.93
RNF220-212ENST00000475378 NMIQ13287 307 aaPredicted RBP20.86■□□□□ 0.93
RNF220-212ENST00000475378 CCDC178Q5BJE1 867 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 TICAM2Q86XR7 235 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 PBXIP1Q96AQ6 731 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 MTMR8Q96EF0 704 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 ZFP91Q96JP5 570 aaPredicted RBP20.86■□□□□ 0.93
RNF220-212ENST00000475378 PRRX2Q99811 253 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 AMNQ9BXJ7 453 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 IGFLR1Q9H665 355 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 PLXNA3P51805 1871 aa20.86■□□□□ 0.93
RNF220-212ENST00000475378 DHX16O60231 1041 aaKnown RBP20.85■□□□□ 0.93
RNF220-212ENST00000475378 CHRNA1P02708 482 aa20.85■□□□□ 0.93
RNF220-212ENST00000475378 PARP1P09874 1014 aaKnown RBP20.85■□□□□ 0.93
RNF220-212ENST00000475378 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
RNF220-212ENST00000475378 NT5C2P49902 561 aa20.85■□□□□ 0.93
RNF220-212ENST00000475378 PKN1Q16512 942 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms