RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 C7orf31Q8N865 590 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 RRP36Q96EU6 259 aaKnown RBP13.62□□□□□ -0.23
CLIP2-204ENST00000474962 SPATA33Q96N06 139 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLIP2-204ENST00000474962 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
CLIP2-204ENST00000474962 KIAA1217Q5T5P2 1943 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 hCG_1642624A0A1W2PR95 340 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 HAS3O00219 553 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 MEIS2O14770 477 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 CPLX1O14810 134 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 ATP2A2P16615 1042 aaKnown RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 CCND2P30279 289 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 AK2P54819 239 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 ADGRE1Q14246 886 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 HIC1Q14526 733 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 MFSD10Q14728 455 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 RAB30Q15771 203 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 CPLX2Q6PUV4 134 aaKnown RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 USP38Q8NB14 1042 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 ZNF274Q96GC6 653 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 COL25A1Q9BXS0 654 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 SLKQ9H2G2 1235 aaPredicted RBP13.61□□□□□ -0.23
CLIP2-204ENST00000474962 MLXIPQ9HAP2 919 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 GTF2IRD1Q9UHL9 959 aa13.61□□□□□ -0.23
CLIP2-204ENST00000474962 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 TRIP12Q14669 1992 aaPredicted RBP13.6□□□□□ -0.23
CLIP2-204ENST00000474962 SPATA31C2B4DYI2 1134 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 F2P00734 622 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 UBA1P22314 1058 aaKnown RBP13.6□□□□□ -0.23
CLIP2-204ENST00000474962 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 RFC2P35250 354 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 STK3Q13188 491 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 SCN5AQ14524 2016 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 WNT8BQ93098 351 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
CLIP2-204ENST00000474962 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 TELO2Q9Y4R8 837 aa13.6□□□□□ -0.23
CLIP2-204ENST00000474962 PFKMP08237 780 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 CKBP12277 381 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 ACTN1P12814 892 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
CLIP2-204ENST00000474962 PDIA3P30101 505 aaKnown RBP13.59□□□□□ -0.23
CLIP2-204ENST00000474962 CCT2P78371 535 aaKnown RBP13.59□□□□□ -0.23
CLIP2-204ENST00000474962 AKAP17AQ02040 695 aaKnown RBP13.59□□□□□ -0.23
CLIP2-204ENST00000474962 SEMA3FQ13275 785 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 CYFIP1Q7L576 1253 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 TET1Q8NFU7 2136 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 KIF2CQ99661 725 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 PRDM6Q9NQX0 595 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
CLIP2-204ENST00000474962 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
CLIP2-204ENST00000474962 H3BRB1 525 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 NBNO60934 754 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 SELPP16109 830 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 IGFBP4P22692 258 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 ICAM3P32942 547 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 EVCP57679 992 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 CCDC85BQ15834 202 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-204ENST00000474962 TCTN1Q2MV58 587 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 CAGE1Q8TC20 777 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 AFAP1L1Q8TED9 768 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 CUL5Q93034 780 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-204ENST00000474962 INPP4AQ96PE3 977 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-204ENST00000474962 GAS2L1Q99501 681 aaPredicted RBP13.58□□□□□ -0.24
CLIP2-204ENST00000474962 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
CLIP2-204ENST00000474962 PSTPIP2Q9H939 334 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
CLIP2-204ENST00000474962 RFXAPO00287 272 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 CA3P07451 260 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 MCM2P49736 904 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 PTK7Q13308 1070 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
CLIP2-204ENST00000474962 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 PPP2R2DQ66LE6 453 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 TRAF7Q6Q0C0 670 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 TMTC3Q6ZXV5 915 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 LRRC8DQ7L1W4 858 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 TMCO2Q7Z6W1 182 aaPredicted RBP13.57□□□□□ -0.24
CLIP2-204ENST00000474962 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 TPCN1Q9ULQ1 816 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 FRMPD4Q14CM0 1322 aa13.57□□□□□ -0.24
CLIP2-204ENST00000474962 NOP56O00567 594 aaKnown RBP13.56□□□□□ -0.24
CLIP2-204ENST00000474962 ATP9AO75110 1047 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 STAM2O75886 525 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 CDKL5O76039 1030 aa13.56□□□□□ -0.24
CLIP2-204ENST00000474962 ARHGEF15O94989 841 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms