RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 SCN5AQ14524 2016 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 IGLV3-22A0A075B6J6 115 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 FOSP01100 380 aaPredicted RBP20.56■□□□□ 0.88
EFNA1-204ENST00000474413 LGALS2P05162 132 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 CSF2RAP15509 400 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 FPGSQ05932 587 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 MTMR1Q13613 665 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 MFSD10Q14728 455 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 LRIT3Q3SXY7 679 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 MXRA8Q9BRK3 442 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 HIPK3Q9H422 1215 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 PKD2L1Q9P0L9 805 aa20.56■□□□□ 0.88
EFNA1-204ENST00000474413 FAM86B1E9PN63 330 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 M0R2N6 131 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 PPFIA4O75335 1185 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 ARP10275 920 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 HOXC8P31273 242 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 PTPN11Q06124 597 aaPredicted RBP20.55■□□□□ 0.88
EFNA1-204ENST00000474413 ITGB3BPQ13352 177 aaPredicted RBP20.55■□□□□ 0.88
EFNA1-204ENST00000474413 NEDD9Q14511 834 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 FAM47CQ5HY64 1035 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 NLRX1Q86UT6 975 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 REXO1Q8N1G1 1221 aaKnown RBP20.55■□□□□ 0.88
EFNA1-204ENST00000474413 NECAB1Q8N987 351 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 WNT8BQ93098 351 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 MLXIPQ9HAP2 919 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 KCNH7Q9NS40 1196 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 HDAC6Q9UBN7 1215 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 GTF2IRD1Q9UHL9 959 aa20.55■□□□□ 0.88
EFNA1-204ENST00000474413 STK36Q9NRP7 1315 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 MEIS1O00470 390 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 NEK4P51957 841 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 CHMP4BP1P59074 171 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 SP4Q02446 784 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 SSRP1Q08945 709 aaKnown RBP20.54■□□□□ 0.88
EFNA1-204ENST00000474413 KIAA0753Q2KHM9 967 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 GLT8D2Q9H1C3 349 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 SLKQ9H2G2 1235 aaPredicted RBP20.54■□□□□ 0.88
EFNA1-204ENST00000474413 SH3GLB2Q9NR46 395 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 GJB4Q9NTQ9 266 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 CDH23Q9H251 3354 aa20.54■□□□□ 0.88
EFNA1-204ENST00000474413 CPLX1O14810 134 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 DEXIO95424 95 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 CYP3A4P08684 503 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 FDPSP14324 419 aaKnown RBP20.53■□□□□ 0.88
EFNA1-204ENST00000474413 ZNF200P98182 395 aaPredicted RBP20.53■□□□□ 0.88
EFNA1-204ENST00000474413 AKAP17AQ02040 695 aaKnown RBP20.53■□□□□ 0.88
EFNA1-204ENST00000474413 CEP55Q53EZ4 464 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
EFNA1-204ENST00000474413 LENG9Q96B70 501 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■■■■□ 20.1
EFNA1-204ENST00000474413 ALG1Q9BT22 464 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 C6orf50Q9HD87 102 aa20.53■□□□□ 0.88
EFNA1-204ENST00000474413 TRIP12Q14669 1992 aaPredicted RBP20.52■□□□□ 0.88
EFNA1-204ENST00000474413 GSTTP1A0A1W2PQM5 241 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 CCL23P55773 120 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 ANKRD1Q15327 319 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 TRIM22Q8IYM9 498 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 CCDC148Q8NFR7 591 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 SCLYQ96I15 445 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 CDHR1Q96JP9 859 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 PCYT2Q99447 389 aa20.52■□□□□ 0.88
EFNA1-204ENST00000474413 AGO4Q9HCK5 861 aaKnown RBP20.52■□□□□ 0.88
EFNA1-204ENST00000474413 CHD9Q3L8U1 2897 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 ACRP10323 421 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 RBM25P49756 843 aaKnown RBP20.51■□□□□ 0.87
EFNA1-204ENST00000474413 PTGISQ16647 500 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 TRIM71Q2Q1W2 868 aaKnown RBP20.51■□□□□ 0.87
EFNA1-204ENST00000474413 TMEM240Q5SV17 173 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 RASIP1Q5U651 963 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 TRAF7Q6Q0C0 670 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 NIPA1Q7RTP0 329 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 DAGLBQ8NCG7 672 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 KATNAL1Q9BW62 490 aa20.51■□□□□ 0.87
EFNA1-204ENST00000474413 H3BRB1 525 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 NOP56O00567 594 aaKnown RBP20.5■□□□□ 0.87
EFNA1-204ENST00000474413 JAK2O60674 1132 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 EIF5BO60841 1220 aaKnown RBP20.5■□□□□ 0.87
EFNA1-204ENST00000474413 CCNE2O96020 404 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 SUPT20HL2P0C7V6 817 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 GNA11P29992 359 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 RBL2Q08999 1139 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 GPNMBQ14956 572 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 FAM109BQ6ICB4 259 aaPredicted RBP20.5■□□□□ 0.87
EFNA1-204ENST00000474413 NSUN7Q8NE18 718 aaKnown RBP20.5■□□□□ 0.87
EFNA1-204ENST00000474413 TUT1Q9H6E5 874 aaKnown RBP20.5■□□□□ 0.87
EFNA1-204ENST00000474413 PCDHA4Q9UN74 947 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 KCNJ14Q9UNX9 436 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 NFASCO94856 1347 aa20.5■□□□□ 0.87
EFNA1-204ENST00000474413 SIP14410 1827 aa20.49■□□□□ 0.87
EFNA1-204ENST00000474413 DHX15O43143 795 aaKnown RBP20.49■□□□□ 0.87
EFNA1-204ENST00000474413 SMIM10L2AP0DMW4 78 aa20.49■□□□□ 0.87
EFNA1-204ENST00000474413 SMIM10L2BP0DMW5 78 aa20.49■□□□□ 0.87
EFNA1-204ENST00000474413 CIITAP33076 1130 aa20.49■□□□□ 0.87
EFNA1-204ENST00000474413 TCF7P36402 384 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms