RNA–Protein interactions for RNA: ENST00000474344.1

VANGL1-205, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 2

Gene VANGL1, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-205ENST00000474344 CCDC194A0A1B0GVG4 234 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 A0A1W2PQ45 241 aaPredicted RBP11.85□□□□□ -0.51
VANGL1-205ENST00000474344 A0A1W2PQY0 241 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 KBTBD13C9JR72 458 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 CAPN15O75808 1086 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 MMP3P08254 477 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
VANGL1-205ENST00000474344 C1orf53Q5VUE5 145 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 PIK3AP1Q6ZUJ8 805 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 SLC43A3Q8NBI5 491 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 PCSK9Q8NBP7 692 aaKnown RBP11.85□□□□□ -0.51
VANGL1-205ENST00000474344 C11orf49Q9H6J7 331 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 KIF3AQ9Y496 699 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 ELP1O95163 1332 aa11.85□□□□□ -0.51
VANGL1-205ENST00000474344 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 MSH4O15457 936 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 PPFIA4O75335 1185 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 TDP2O95551 362 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 ZNF76P36508 570 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 CPT1AP50416 773 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 CDK7P50613 346 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 LARP1BQ659C4 914 aaKnown RBP11.84□□□□□ -0.51
VANGL1-205ENST00000474344 B3GNT9Q6UX72 402 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 NEK8Q86SG6 692 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 NOSTRINQ8IVI9 506 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
VANGL1-205ENST00000474344 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 KAT2BQ92831 832 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 SLC5A5Q92911 643 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 GPR20Q99678 358 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 BRMS1Q9HCU9 246 aa11.84□□□□□ -0.51
VANGL1-205ENST00000474344 LTBP2Q14767 1821 aa11.83□□□□□ -0.51
VANGL1-205ENST00000474344 HAS3O00219 553 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SLC37A4O43826 429 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 KPNA6O60684 536 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 ATG7O95352 703 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 GCFC2P16383 781 aaKnown RBP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SYT1P21579 422 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 TOB1P50616 345 aaPredicted RBP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 PRR16Q569H4 304 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 CXCL17Q6UXB2 119 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 HAS1Q92839 578 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SPATA33Q96N06 139 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 C16orf70Q9BSU1 422 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SENP6Q9GZR1 1112 aaPredicted RBP11.83□□□□□ -0.52
VANGL1-205ENST00000474344 MLXIPQ9HAP2 919 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 KCNMB3Q9NPA1 279 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
VANGL1-205ENST00000474344 SCN5AQ14524 2016 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 ARID2Q68CP9 1835 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 IGKV6D-21A0A0A0MT36 114 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 ZEB2O60315 1214 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 SORBS3O60504 671 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 PSMD10O75832 226 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 CABYRO75952 493 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 CCNE2O96020 404 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 F2P00734 622 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 DGKDQ16760 1214 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 LETM2Q2VYF4 491 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 SEPT1Q8WYJ6 367 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 PCYT2Q99447 389 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 RIT2Q99578 217 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 TBC1D22BQ9NU19 505 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
VANGL1-205ENST00000474344 TBX3O15119 743 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 LGR5O75473 907 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 MYCNP04198 464 aaPredicted RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 PDCP20941 246 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 ACTR2P61160 394 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 BRDTQ58F21 947 aaPredicted RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 ANKRD33Q7Z3H0 272 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 C4orf32Q8N8J7 132 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 GJA10Q969M2 543 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 GLT1D1Q96MS3 346 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 UIMC1Q96RL1 719 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 JPH1Q9HDC5 661 aaPredicted RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 PKD2L1Q9P0L9 805 aa11.81□□□□□ -0.52
VANGL1-205ENST00000474344 DDX25Q9UHL0 483 aaKnown RBP11.81□□□□□ -0.52
VANGL1-205ENST00000474344 ARVCFO00192 962 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 CCNT1O60563 726 aaKnown RBP11.8□□□□□ -0.52
VANGL1-205ENST00000474344 LGALS2P05162 132 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 MYL3P08590 195 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 HOXC8P31273 242 aa11.8□□□□□ -0.52
VANGL1-205ENST00000474344 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms