RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TMEM98Q9Y2Y6 226 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 GMEB1Q9Y692 573 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 SSH2Q76I76 1423 aa8.18□□□□□ -1.1
GPNMB-209ENST00000474157 A0A0A0MRY4 1105 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ERICH2A1L162 156 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ADAM11O75078 769 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 F13A1P00488 732 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 MYL1P05976 194 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 KCNA2P16389 499 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ZFXP17010 805 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 CD68P34810 354 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 KCNJ6P48051 423 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 CLNS1AP54105 237 aaKnown RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ARID5AQ03989 594 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 PTPN11Q06124 597 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 IFFO1Q0D2I5 559 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 PABPC4Q13310 644 aaKnown RBP eCLIP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 PTPN14Q15678 1187 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 DDB1Q16531 1140 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 SFMBT2Q5VUG0 894 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 CWF19L1Q69YN2 538 aaKnown RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 SLC30A9Q6PML9 568 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 SYNE3Q6ZMZ3 975 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC65Q8IXS2 484 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 SMYD1Q8NB12 490 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC150Q8NCX0 1101 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 OR8K1Q8NGG5 319 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 TBC1D5Q92609 795 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ARHGAP45Q92619 1136 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 FAM81BQ96LP2 452 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 RUFY1Q96T51 708 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 TANGO6Q9C0B7 1094 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 EXOC1Q9NV70 894 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 KCNK4Q9NYG8 393 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 ZNF215Q9UL58 517 aaPredicted RBP8.17□□□□□ -1.1
GPNMB-209ENST00000474157 AATKQ6ZMQ8 1374 aa8.17□□□□□ -1.1
GPNMB-209ENST00000474157 SYCE3A1L190 88 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ENO4A6NNW6 628 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 TMEM232C9JQI7 657 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 EBAG9O00559 213 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 GNB5O14775 395 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 POLR3GO15318 223 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 TLR3O15455 904 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 TOMM70O94826 608 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 FSBPO95073 299 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 CAVIN2O95810 425 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 MSL3P1P0C860 447 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ARHGAP25P42331 645 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 CRKP46108 304 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 RAC1P63000 192 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ST5P78524 1137 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 APOBRQ0VD83 1088 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 DRP2Q13474 957 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 TPD52L1Q16890 204 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ZFYVE27Q5T4F4 411 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 MTHFD1LQ6UB35 978 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 SPATA31E1Q6ZUB1 1445 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 B4GALNT4Q76KP1 1039 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 RSPH3Q86UC2 560 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 FBXO11Q86XK2 927 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 VPS37DQ86XT2 251 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 B4GALNT2Q8NHY0 566 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 FBXO27Q8NI29 283 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 HNRNPLLQ8WVV9 542 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 GATAD2BQ8WXI9 593 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 UBXN4Q92575 508 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 GTF3C6Q969F1 213 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ZKSCAN4Q969J2 545 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ACSBG1Q96GR2 724 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC114Q96M63 670 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ANKRD27Q96NW4 1050 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 NAP1L3Q99457 506 aaPredicted RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ARFGAP3Q9NP61 516 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 PDRG1Q9NUG6 133 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 PRKAG2Q9UGJ0 569 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 DDX25Q9UHL0 483 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 GGA2Q9UJY4 613 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 MKL2Q9ULH7 1088 aa8.16□□□□□ -1.1
GPNMB-209ENST00000474157 TPX2Q9ULW0 747 aaKnown RBP8.16□□□□□ -1.1
GPNMB-209ENST00000474157 ANKRD30BQ9BXX2 1392 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 LOC100289279A0A1B0GTE1 492 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 FAM221AA4D161 298 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 EFCAB8A8MWE9 144 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.15□□□□□ -1.1
GPNMB-209ENST00000474157 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 ABLIM1O14639 778 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 SRGAP3O43295 1099 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 MARCH6O60337 910 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 ZBED4O75132 1171 aa8.15□□□□□ -1.1
GPNMB-209ENST00000474157 VIL1P09327 827 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms