RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GPR20Q99678 358 aa21.62■■□□□ 1.05
PTCD3-210ENST00000473829 LBHD1Q9BQE6 289 aaPredicted RBP21.62■■□□□ 1.05
PTCD3-210ENST00000473829 SEZ6LQ9BYH1 1024 aa21.62■■□□□ 1.05
PTCD3-210ENST00000473829 UBE2OQ9C0C9 1292 aaKnown RBP21.62■■□□□ 1.05
PTCD3-210ENST00000473829 HAS3O00219 553 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 PPFIA4O75335 1185 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 ARP10275 920 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 FDPSP14324 419 aaKnown RBP21.61■■□□□ 1.05
PTCD3-210ENST00000473829 PSEN2P49810 448 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 SP4Q02446 784 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 CEP55Q53EZ4 464 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 BICD2Q8TD16 824 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 CDHR1Q96JP9 859 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 C16orf70Q9BSU1 422 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 KCNH7Q9NS40 1196 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 GJB4Q9NTQ9 266 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 PCDHA4Q9UN74 947 aa21.61■■□□□ 1.05
PTCD3-210ENST00000473829 UMODL1Q5DID0 1318 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 FAM86B1E9PN63 330 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 EDIL3O43854 480 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 LGALS2P05162 132 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 FAM86B2P0C5J1 330 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 MFSD10Q14728 455 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 NSUN7Q8NE18 718 aaKnown RBP21.6■■□□□ 1.05
PTCD3-210ENST00000473829 ALG1Q9BT22 464 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 PPP1R12CQ9BZL4 782 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 ORC3Q9UBD5 711 aaPredicted RBP21.6■■□□□ 1.05
PTCD3-210ENST00000473829 KCNJ14Q9UNX9 436 aa21.6■■□□□ 1.05
PTCD3-210ENST00000473829 IGLV3-22A0A075B6J6 115 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 M0R2N6 131 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 MEIS1O00470 390 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 NOP56O00567 594 aaKnown RBP21.59■■□□□ 1.05
PTCD3-210ENST00000473829 JAK2O60674 1132 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 TIMP1P01033 207 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 CYP3A4P08684 503 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 EPHB4P54760 987 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 KIAA0753Q2KHM9 967 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 MCTP2Q6DN12 878 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 TRIM50Q86XT4 487 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 DAGLBQ8NCG7 672 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 CTAGE1Q96RT6 745 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 LIMCH1Q9UPQ0 1083 aa21.59■■□□□ 1.05
PTCD3-210ENST00000473829 MAFGO15525 162 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 CYP2C9P11712 490 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 CYP2C18P33260 490 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 ITGB3BPQ13352 177 aaPredicted RBP21.58■■□□□ 1.05
PTCD3-210ENST00000473829 GDF6Q6KF10 455 aaPredicted RBP21.58■■□□□ 1.05
PTCD3-210ENST00000473829 SESTD1Q86VW0 696 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 BLIDQ8IZY5 108 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 GIMAP8Q8ND71 665 aaPredicted RBP21.58■■□□□ 1.05
PTCD3-210ENST00000473829 PHF20Q9BVI0 1012 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 NOC4LQ9BVI4 516 aaKnown RBP21.58■■□□□ 1.05
PTCD3-210ENST00000473829 KATNAL1Q9BW62 490 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 HIPK3Q9H422 1215 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 AGO4Q9HCK5 861 aaKnown RBP21.58■■□□□ 1.05
PTCD3-210ENST00000473829 HDAC6Q9UBN7 1215 aa21.58■■□□□ 1.05
PTCD3-210ENST00000473829 LAMA2P24043 3122 aaKnown RBP21.58■■□□□ 1.04
PTCD3-210ENST00000473829 A0A1W2PPC1 479 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 ZNF76P36508 570 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 PTPN11Q06124 597 aaPredicted RBP21.57■■□□□ 1.04
PTCD3-210ENST00000473829 HIC1Q14526 733 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 NIPA1Q7RTP0 329 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 TDHQ8IZJ6 230 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 FAM177A1Q8N128 213 aaPredicted RBP21.57■■□□□ 1.04
PTCD3-210ENST00000473829 UIMC1Q96RL1 719 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 TANC1Q9C0D5 1861 aa21.57■■□□□ 1.04
PTCD3-210ENST00000473829 TRIP12Q14669 1992 aaPredicted RBP21.57■■□□□ 1.04
PTCD3-210ENST00000473829 GSTTP1A0A1W2PQM5 241 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 FXR1P51114 621 aaKnown RBP eCLIP21.56■■□□□ 1.04
PTCD3-210ENST00000473829 C9orf50Q5SZB4 431 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 UTP14CQ5TAP6 766 aaKnown RBP21.56■■□□□ 1.04
PTCD3-210ENST00000473829 MFSD5Q6N075 450 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 PLA2G4DQ86XP0 818 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 CCDC83Q8IWF9 413 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 TBC1D32Q96NH3 1257 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 WNT8AQ9H1J5 351 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
PTCD3-210ENST00000473829 JPH1Q9HDC5 661 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-210ENST00000473829 GTF2IRD1Q9UHL9 959 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 SZT2Q5T011 3432 aa21.56■■□□□ 1.04
PTCD3-210ENST00000473829 NFASCO94856 1347 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 H3BRB1 525 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 SUPT20HL2P0C7V6 817 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 CIITAP33076 1130 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 TCF7P36402 384 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-210ENST00000473829 FPGSQ05932 587 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 RABEP1Q15276 862 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 C7orf31Q8N865 590 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 OXER1Q8TDS5 423 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 TBCKQ8TEA7 893 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 LENG9Q96B70 501 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 TUT1Q9H6E5 874 aaKnown RBP21.55■■□□□ 1.04
PTCD3-210ENST00000473829 SLC9A2Q9UBY0 812 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 SCN5AQ14524 2016 aa21.55■■□□□ 1.04
PTCD3-210ENST00000473829 SOX1O00570 391 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-210ENST00000473829 CSF2RAP15509 400 aa21.54■■□□□ 1.04
PTCD3-210ENST00000473829 CCL23P55773 120 aa21.54■■□□□ 1.04
PTCD3-210ENST00000473829 ZNF200P98182 395 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-210ENST00000473829 SHHQ15465 462 aa21.54■■□□□ 1.04
PTCD3-210ENST00000473829 PTGISQ16647 500 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms