RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 COL5A2P05997 1499 aaPredicted RBP3.21□□□□□ -1.9
CALD1-216ENST00000473714 hCG_2014768A0A024R1R8 64 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 A0A1W2PPC1 479 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 WASH4PA8MWX3 477 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 H0YGN5 161 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 MATN3O15232 486 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 CELA3AP09093 270 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 DPEP1P16444 411 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 HMGB2P26583 209 aaKnown RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 ETFBP38117 255 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 GDF5P43026 501 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 KCNC1P48547 511 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 ZNF165P49910 485 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 EPHB3P54753 998 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 IGBP1P78318 339 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 LMNB2Q03252 620 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 EGR3Q06889 387 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 NKG7Q16617 165 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 ZFYVE27Q5T4F4 411 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 ADGRF1Q5T601 910 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 PCNX4Q63HM2 1172 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 CCDC81Q6ZN84 652 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 PHC3Q8NDX5 983 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 C3orf58Q8NDZ4 430 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 ZCRB1Q8TBF4 217 aaKnown RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 ELMO3Q96BJ8 720 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 EAF1Q96JC9 268 aaPredicted RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 SRRTQ9BXP5 876 aaKnown RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 SLITRK6Q9H5Y7 841 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 WDR26Q9H7D7 661 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 EPB41L4AQ9HCS5 686 aaPredicted RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 ST7Q9NRC1 585 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 SAGE1Q9NXZ1 904 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 DUSP13Q9UII6 198 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 MRPL42Q9Y6G3 142 aaKnown RBP3.2□□□□□ -1.9
CALD1-216ENST00000473714 TAF1LQ8IZX4 1826 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 CPDO75976 1380 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 PLEKHH1Q9ULM0 1364 aa3.2□□□□□ -1.9
CALD1-216ENST00000473714 CEP162Q5TB80 1403 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 TOGARAM1Q9Y4F4 1720 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 DICER1Q9UPY3 1922 aaKnown RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 PRAMEF27A3QJZ7 478 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 IQCA1LA6NCM1 817 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 HRKO00198 91 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 ENC1O14682 589 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 BMP6P22004 513 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 HSD3B2P26439 372 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 PTPN11Q06124 597 aaPredicted RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 GRM1Q13255 1194 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 SLBPQ14493 270 aaKnown RBP eCLIP3.19□□□□□ -1.9
CALD1-216ENST00000473714 INPP5AQ14642 412 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 DALRD3Q5D0E6 543 aaKnown RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 LARP1BQ659C4 914 aaKnown RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 OLFML2BQ68BL8 750 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 INTS3Q68E01 1043 aaKnown RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 ZNF662Q6ZS27 426 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 GK5Q6ZS86 529 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 FAM129CQ86XR2 697 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 CNTROBQ8N137 903 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 DEFB123Q8N688 67 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 HNRNPLLQ8WVV9 542 aaKnown RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 PWWP2AQ96N64 755 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 NECAB3Q96P71 396 aaPredicted RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 DEPDC7Q96QD5 511 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 DUSP15Q9H1R2 295 aaPredicted RBP3.19□□□□□ -1.9
CALD1-216ENST00000473714 CNTD2Q9H8S5 307 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 DDX21Q9NR30 783 aaKnown RBP eCLIP3.19□□□□□ -1.9
CALD1-216ENST00000473714 GPATCH2Q9NW75 528 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 MTMR10Q9NXD2 777 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 PPT2Q9UMR5 302 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 PCDHA4Q9UN74 947 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 GPRASP1Q5JY77 1395 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 SBNO2Q9Y2G9 1366 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 RGPD5Q99666 1765 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 TRPM7Q96QT4 1865 aa3.19□□□□□ -1.9
CALD1-216ENST00000473714 MUC3AQ02505 3323 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 UBR3Q6ZT12 1888 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 PPLO60437 1756 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 PAPPA2Q9BXP8 1791 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 C5P01031 1676 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 IRS4O14654 1257 aaPredicted RBP3.18□□□□□ -1.9
CALD1-216ENST00000473714 SMAD7O15105 426 aaKnown RBP3.18□□□□□ -1.9
CALD1-216ENST00000473714 DDAH1O94760 285 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 F13A1P00488 732 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 IMPDH2P12268 514 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 TFE3P19532 575 aaPredicted RBP3.18□□□□□ -1.9
CALD1-216ENST00000473714 CAP2P40123 477 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 SOX9P48436 509 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 CDK8P49336 464 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 GALK1P51570 392 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 RPS26P62854 115 aaKnown RBP3.18□□□□□ -1.9
CALD1-216ENST00000473714 ADAM17P78536 824 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 DUSP4Q13115 394 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 RAB33AQ14088 237 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 FXNQ16595 210 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 GAB4Q2WGN9 574 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 LLGL2Q6P1M3 1020 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 LRFN4Q6PJG9 635 aa3.18□□□□□ -1.9
CALD1-216ENST00000473714 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.18□□□□□ -1.9
CALD1-216ENST00000473714 BNC2Q6ZN30 1099 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms