RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PPP1R11O60927 126 aaPredicted RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 LGR5O75473 907 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 HOXD8P13378 290 aaPredicted RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 CASTP20810 708 aaKnown RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 MRPL12P52815 198 aaKnown RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 PTK7Q13308 1070 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 MFSD10Q14728 455 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 STXBP2Q15833 593 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 CDC37Q16543 378 aaPredicted RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 KIAA0753Q2KHM9 967 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 SLC35G1Q2M3R5 365 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 EPC2Q52LR7 807 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 MFSD6Q6ZSS7 791 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 MYOCDQ8IZQ8 938 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 DBF4BQ8NFT6 615 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 NSUN6Q8TEA1 469 aaKnown RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 EDAQ92838 391 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 GPKOWQ92917 476 aaPredicted RBP eCLIP10.91□□□□□ -0.66
VCL-204ENST00000472585 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
VCL-204ENST00000472585 RMDN3Q96TC7 470 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 TELO2Q9Y4R8 837 aa10.91□□□□□ -0.66
VCL-204ENST00000472585 ZMYM6O95789 1325 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 H3BNC9 293 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 F2P00734 622 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 NR3C2P08235 984 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 EIF2AK2P19525 551 aaKnown RBP10.9□□□□□ -0.66
VCL-204ENST00000472585 HTRA4P83105 476 aaPredicted RBP10.9□□□□□ -0.66
VCL-204ENST00000472585 DGKDQ16760 1214 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 HSDL1Q3SXM5 330 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 MYSM1Q5VVJ2 828 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 BMP8AQ7Z5Y6 402 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 DGKHQ86XP1 1220 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 RNF135Q8IUD6 432 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 EFCAB3Q8N7B9 438 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 C7orf31Q8N865 590 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 IL31RAQ8NI17 732 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 IWS1Q96ST2 819 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 C16orf70Q9BSU1 422 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 IRF2BPLQ9H1B7 796 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 VAT1LQ9HCJ6 419 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
VCL-204ENST00000472585 CACNA1HO95180 2353 aa10.9□□□□□ -0.66
VCL-204ENST00000472585 TMEM221A6NGB7 291 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 M0R296 226 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 EIF3JO75822 258 aaKnown RBP10.89□□□□□ -0.67
VCL-204ENST00000472585 HSD17B4P51659 736 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 LAMC2Q13753 1193 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 SMAD2Q15796 467 aaKnown RBP10.89□□□□□ -0.67
VCL-204ENST00000472585 CLUL1Q15846 466 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
VCL-204ENST00000472585 RPAINQ86UA6 219 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 YME1L1Q96TA2 773 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 PXMP2Q9NR77 195 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 ZSWIM5Q9P217 1185 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 PNMA2Q9UL42 364 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 RALGAPA2Q2PPJ7 1873 aa10.89□□□□□ -0.67
VCL-204ENST00000472585 ABCB11O95342 1321 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 CCDC171Q6TFL3 1326 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 EMSYQ7Z589 1322 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 STXBP3O00186 592 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 MBTPS2O43462 519 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 KDM4AO75164 1064 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 LINC00271P0C7V0 271 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 HOXC8P31273 242 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 LTBRP36941 435 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 GHRHRQ02643 423 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 CELF3Q5SZQ8 465 aaKnown RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 RIF1Q5UIP0 2472 aaKnown RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 ARHGEF16Q5VV41 709 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 STOX1Q6ZVD7 989 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 SERINC5Q86VE9 423 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 DHX37Q8IY37 1157 aaKnown RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 ENAHQ8N8S7 591 aaPredicted RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 ATOH1Q92858 354 aaPredicted RBP10.88□□□□□ -0.67
VCL-204ENST00000472585 PDCD2LQ9BRP1 358 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 MAF1Q9H063 256 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 FAM86C1Q9NVL1 165 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 MRVI1Q9Y6F6 885 aa10.88□□□□□ -0.67
VCL-204ENST00000472585 RSPH10B2B2RC85 870 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 B4E1Z4 1266 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 TREHO43280 583 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 UPP2O95045 317 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 CFBP00751 764 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 RSPH10BP0C881 870 aa10.87□□□□□ -0.67
VCL-204ENST00000472585 MYCLP12524 364 aaPredicted RBP10.87□□□□□ -0.67
VCL-204ENST00000472585 SDSP20132 328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms