RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 CXCL17Q6UXB2 119 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 GLT1D1Q96MS3 346 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 RNF26Q9BY78 433 aaPredicted RBP13.6□□□□□ -0.23
CLRN1-205ENST00000472224 RIC8AQ9NPQ8 531 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 TMEM39AQ9NV64 488 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
CLRN1-205ENST00000472224 DTNBO60941 627 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 GH1P01241 217 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 CPT1AP50416 773 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 NTRK3Q16288 839 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 PKN1Q16512 942 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
CLRN1-205ENST00000472224 TMEM240Q5SV17 173 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 CCSAPQ6IQ19 270 aaPredicted RBP13.59□□□□□ -0.23
CLRN1-205ENST00000472224 VSIG10LQ86VR7 867 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 CCDC12Q8WUD4 166 aaPredicted RBP13.59□□□□□ -0.23
CLRN1-205ENST00000472224 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 C11orf16Q9NQ32 467 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 VPS54Q9P1Q0 977 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 Q9Y3F1 56 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
CLRN1-205ENST00000472224 A0A0U1RQG5 324 aaPredicted RBP13.58□□□□□ -0.24
CLRN1-205ENST00000472224 CDKL5O76039 1030 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 RGS20O76081 388 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 LARGE1O95461 756 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 TIMP1P01033 207 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 CHMP4BP1P59074 171 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 MRPS9P82933 396 aaKnown RBP13.58□□□□□ -0.24
CLRN1-205ENST00000472224 GNPTABQ3T906 1256 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 ANKRD33Q7Z3H0 272 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 NECAB1Q8N987 351 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 AFG1LQ8WV93 481 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 KHSRPQ92945 711 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLRN1-205ENST00000472224 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 SCN10AQ9Y5Y9 1956 aa13.58□□□□□ -0.24
CLRN1-205ENST00000472224 WDFY4Q6ZS81 3184 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 PFKFB2O60825 505 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 GGPS1O95749 300 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 UBA1P22314 1058 aaKnown RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 PSMC6P62333 389 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 ARHGAP1Q07960 439 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 ALDH8A1Q9H2A2 487 aaPredicted RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 C6orf50Q9HD87 102 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 POLR3EQ9NVU0 708 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 PKD2L1Q9P0L9 805 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 DDX41Q9UJV9 622 aaKnown RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 YBX2Q9Y2T7 364 aaKnown RBP13.57□□□□□ -0.24
CLRN1-205ENST00000472224 PIEZO1Q92508 2521 aa13.57□□□□□ -0.24
CLRN1-205ENST00000472224 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 FIBPO43427 364 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 STAM2O75886 525 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 CABYRO75952 493 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 DEXIO95424 95 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 MMP3P08254 477 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 NLRP5P59047 1200 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 NKX3-2P78367 333 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 SP4Q02446 784 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 AP3B2Q13367 1082 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 ME3Q16798 604 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 TMEM31Q5JXX7 168 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 XRRA1Q6P2D8 792 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 NLRX1Q86UT6 975 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
CLRN1-205ENST00000472224 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 AIFM3Q96NN9 605 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
CLRN1-205ENST00000472224 NKX2-4Q9H2Z4 354 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 ELP1O95163 1332 aa13.56□□□□□ -0.24
CLRN1-205ENST00000472224 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ADAMTS3O15072 1205 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 FOSP01100 380 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ZNF286BP0CG31 522 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ACRP10323 421 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 CSF2RAP15509 400 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 GNA11P29992 359 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 FOSBP53539 338 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
CLRN1-205ENST00000472224 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ITGA7Q13683 1181 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
CLRN1-205ENST00000472224 BICD2Q8TD16 824 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-205ENST00000472224 SPATA33Q96N06 139 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 MTG1Q9BT17 334 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms