RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 SBK1Q52WX2 424 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 ZSCAN25Q6NSZ9 544 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 SEPT14Q6ZU15 432 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 SERINC5Q86VE9 423 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 SUSD6Q92537 303 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
CDHR3-209ENST00000472116 OTOGLQ3ZCN5 2332 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 PRDM1O75626 825 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 BRD1O95696 1058 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 GLP2RO95838 553 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CTSHP09668 335 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 EDNRBP24530 442 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
CDHR3-209ENST00000472116 UBE3CQ15386 1083 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 LY6KQ17RY6 165 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 RSPO4Q2I0M5 234 aaPredicted RBP12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 KIAA0319Q5VV43 1072 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 ZC3H14Q6PJT7 736 aaKnown RBP12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CCDC105Q8IYK2 499 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 POF1BQ8WVV4 589 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 RUBCNQ92622 972 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 MTMR7Q9Y216 660 aa12.09□□□□□ -0.47
CDHR3-209ENST00000472116 CFAP47Q6ZTR5 3102 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 TDO2P48775 406 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
CDHR3-209ENST00000472116 LAMC2Q13753 1193 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 CAMK1Q14012 370 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 CDCA3Q99618 268 aaPredicted RBP12.08□□□□□ -0.48
CDHR3-209ENST00000472116 RTP3Q9BQQ7 232 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
CDHR3-209ENST00000472116 STX8Q9UNK0 236 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 DNAH14Q0VDD8 3507 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 DMDP11532 3685 aa12.08□□□□□ -0.48
CDHR3-209ENST00000472116 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 HAS3O00219 553 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 ITGB1P05556 798 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 SLC3A2P08195 630 aaKnown RBP12.07□□□□□ -0.48
CDHR3-209ENST00000472116 IFIT2P09913 472 aaKnown RBP12.07□□□□□ -0.48
CDHR3-209ENST00000472116 LINC00271P0C7V0 271 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
CDHR3-209ENST00000472116 ACAP1Q15027 740 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 SLFNL1Q499Z3 407 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 HSP90AB4PQ58FF6 505 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 CLASRPQ8N2M8 674 aaKnown RBP12.07□□□□□ -0.48
CDHR3-209ENST00000472116 KLHL23Q8NBE8 558 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 NEDD1Q8NHV4 660 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 PPTC7Q8NI37 304 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
CDHR3-209ENST00000472116 PER2O15055 1255 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 AOC1P19801 751 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 RFX1P22670 979 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 DNAJB1P25685 340 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 TECP42680 631 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 CES5AQ6NT32 575 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 CMTR2Q8IYT2 770 aaKnown RBP12.06□□□□□ -0.48
CDHR3-209ENST00000472116 DTWD2Q8NBA8 298 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 FRAT1Q92837 279 aaPredicted RBP12.06□□□□□ -0.48
CDHR3-209ENST00000472116 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
CDHR3-209ENST00000472116 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 ANP32CO43423 234 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 APPP05067 770 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 GNAT1P11488 350 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 TRIM27P14373 513 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 HOXB8P17481 243 aaPredicted RBP12.05□□□□□ -0.48
CDHR3-209ENST00000472116 TFAP4Q01664 338 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 UBE3AQ05086 875 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 STXBP2Q15833 593 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 SYDE2Q5VT97 1194 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 EMID1Q96A84 441 aaPredicted RBP12.05□□□□□ -0.48
CDHR3-209ENST00000472116 NECTIN4Q96NY8 510 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 APOL5Q9BWW9 433 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
CDHR3-209ENST00000472116 R4GN57 208 aa12.05□□□□□ -0.48
CDHR3-209ENST00000472116 STK25O00506 426 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 DGKIO75912 1065 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 DUSP6Q16828 381 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 ANKRD54Q6NXT1 300 aa12.04□□□□□ -0.48
CDHR3-209ENST00000472116 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 NSUN6Q8TEA1 469 aaKnown RBP12.04□□□□□ -0.48
CDHR3-209ENST00000472116 DCAF4Q8WV16 495 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms