RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SUGP1Q8IWZ8 645 aaKnown RBP22.19■■□□□ 1.14
SORT1-203ENST00000471996 MIER1Q8N108 512 aa22.19■■□□□ 1.14
SORT1-203ENST00000471996 IGFLR1Q9H665 355 aa22.19■■□□□ 1.14
SORT1-203ENST00000471996 HELLSQ9NRZ9 838 aa22.19■■□□□ 1.14
SORT1-203ENST00000471996 KIAA1217Q5T5P2 1943 aa22.19■■□□□ 1.14
SORT1-203ENST00000471996 H3BRB1 525 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 SMIM10L2AP0DMW4 78 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 SMIM10L2BP0DMW5 78 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 GTF2F1P35269 517 aaKnown RBP eCLIP22.18■■□□□ 1.141e-8■■□□□ 12.5
SORT1-203ENST00000471996 ADAM15Q13444 863 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 QRICH1Q2TAL8 776 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 C20orf194Q5TEA3 1177 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 RNPEPQ9H4A4 650 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 TUT1Q9H6E5 874 aaKnown RBP22.18■■□□□ 1.14
SORT1-203ENST00000471996 MYO7AQ13402 2215 aa22.18■■□□□ 1.14
SORT1-203ENST00000471996 LINC01565O15544 149 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 EYA4O95677 639 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 CFBP00751 764 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 PCP11498 1178 aaKnown RBP22.17■■□□□ 1.14
SORT1-203ENST00000471996 MYCLP12524 364 aaPredicted RBP22.17■■□□□ 1.14
SORT1-203ENST00000471996 HAND2P61296 217 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 SP2Q02086 613 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 MFSD6Q6ZSS7 791 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 DGKHQ86XP1 1220 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 CLP1Q92989 425 aaKnown RBP22.17■■□□□ 1.14
SORT1-203ENST00000471996 MSLNLQ96KJ4 702 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 PDCD2LQ9BRP1 358 aa22.17■■□□□ 1.14
SORT1-203ENST00000471996 ZMYM6O95789 1325 aa22.16■■□□□ 1.14
SORT1-203ENST00000471996 TGFB3P10600 412 aa22.16■■□□□ 1.14
SORT1-203ENST00000471996 UBA1P22314 1058 aaKnown RBP22.16■■□□□ 1.14
SORT1-203ENST00000471996 HSD17B4P51659 736 aa22.16■■□□□ 1.14
SORT1-203ENST00000471996 ZXDAP98168 799 aa22.16■■□□□ 1.14
SORT1-203ENST00000471996 RALGAPA2Q2PPJ7 1873 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 ADGRA3Q8IWK6 1321 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 GFRA3O60609 400 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 MMP1P03956 469 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 MX1P20591 662 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 GHRHRQ02643 423 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 FAM26DQ5JW98 314 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 VSIG10LQ86VR7 867 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 FBXL6Q8N531 539 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 PNMA1Q8ND90 353 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 ZKSCAN3Q9BRR0 538 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 MLXIPQ9HAP2 919 aa22.15■■□□□ 1.14
SORT1-203ENST00000471996 RC3H2Q9HBD1 1191 aaKnown RBP22.15■■□□□ 1.14
SORT1-203ENST00000471996 NLRC5Q86WI3 1866 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 LOC730098B7Z3J9 87 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 OPLAHO14841 1288 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 LGALS2P05162 132 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 GNAT1P11488 350 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 NDUFV1P49821 464 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 CAMK1Q14012 370 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 STOX1Q6ZVD7 989 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 ESR2Q92731 530 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 EVI5LQ96CN4 794 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 PLVAPQ9BX97 442 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 JMJD4Q9H9V9 463 aa22.14■■□□□ 1.13
SORT1-203ENST00000471996 ALG13Q9NP73 1137 aaKnown RBP22.14■■□□□ 1.13
SORT1-203ENST00000471996 CSPG5O95196 566 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 FOXK2Q01167 660 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 CBX2Q14781 532 aaPredicted RBP22.13■■□□□ 1.13
SORT1-203ENST00000471996 PGM5Q15124 567 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 ASPRV1Q53RT3 343 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 TBC1D10CQ8IV04 446 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 FAM227BQ96M60 508 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 VAT1LQ9HCJ6 419 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 SETD4Q9NVD3 440 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 MAP3K20Q9NYL2 800 aaKnown RBP22.13■■□□□ 1.13
SORT1-203ENST00000471996 PLAGL2Q9UPG8 496 aa22.13■■□□□ 1.13
SORT1-203ENST00000471996 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 CFAP54Q96N23 3096 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 DHX16O60231 1041 aaKnown RBP22.12■■□□□ 1.13
SORT1-203ENST00000471996 SMRP1Q8NCR6 262 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 GPKOWQ92917 476 aaPredicted RBP eCLIP22.12■■□□□ 1.13
SORT1-203ENST00000471996 PPP2R3CQ969Q6 453 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 ZNF689Q96CS4 500 aaPredicted RBP22.12■■□□□ 1.13
SORT1-203ENST00000471996 AMNQ9BXJ7 453 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 USP26Q9BXU7 913 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 RNF41Q9H4P4 317 aaPredicted RBP22.12■■□□□ 1.13
SORT1-203ENST00000471996 KAT14Q9H8E8 782 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 FAM86C1Q9NVL1 165 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 CLEC1BQ9P126 229 aa22.12■■□□□ 1.13
SORT1-203ENST00000471996 A0A0D9SFI3 127 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
SORT1-203ENST00000471996 ADAM17P78536 824 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 COASYQ13057 564 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 BTG3Q14201 252 aaPredicted RBP22.11■■□□□ 1.13
SORT1-203ENST00000471996 CCDC178Q5BJE1 867 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 IL31RAQ8NI17 732 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 IRF2BPLQ9H1B7 796 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 BCAS3Q9H6U6 928 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 RCAN3Q9UKA8 241 aa22.11■■□□□ 1.13
SORT1-203ENST00000471996 NEDD4P46934 1319 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 SALL3Q9BXA9 1300 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 ATG2AQ2TAZ0 1938 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 ENPP3O14638 875 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 CHRNA1P02708 482 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 SIGLEC14Q08ET2 396 aa22.1■■□□□ 1.13
SORT1-203ENST00000471996 EFHBQ8N7U6 833 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms